Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq43799 161 8e-35
seq68470 158 9e-34
seq43778 150 1e-31
seq208088 149 5e-31
seq68153 140 2e-28
seq43779 127 2e-24
seq72069 122 7e-23
seq68514 122 7e-23
seq109229 120 2e-22
seq24834 107 1e-18
seq68490 105 5e-18
seq71848 91.5 1e-13
>seq43799
Length=2218
Score = 161 bits (178), Expect = 8e-35
Identities = 167/216 (77%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||| ||||| ||||||||||| || |||||||| || |||| || | |
Sbjct 91 CGAAGAACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCA 150
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || |||||| | || | || |||||||| || || |||||||| |||
Sbjct 151 TCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTG 210
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||||| |||||||| ||| ||| | || | ||||||||| ||| || |||||||| ||
Sbjct 211 TCTTG-AATTTTTGCTTTCACATTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAAT 269
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| ||||| | |||||| ||||| ||||||||
Sbjct 270 TGTTTTTCCAGTGAGGGTTTTCACAAAGATCTGCAT 305
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || ||||||||||| || ||||| || || ||||| || || |||
Sbjct 535 CCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 594
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || |||||||| || ||| | || | |||||||| || || ||
Sbjct 595 AGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 654
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || || || |||||| | ||||||| | || | |||||||| ||| ||
Sbjct 655 ATCCCTTCCTTATCCTG-AATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCCAC 713
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || ||||| || ||||| | ||| || ||||| ||||||||
Sbjct 714 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 761
Score = 138 bits (152), Expect = 9e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || || || || || || ||||| || || |||| || |||
Sbjct 318 ACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACC 377
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||||||||| ||| | || || || || ||||| || || || ||||| ||
Sbjct 378 ATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTT 437
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || |||||| | || | |||||||| ||| || || | ||||||
Sbjct 438 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTAT 497
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || ||||| | |||||| ||||| ||||||||
Sbjct 498 AGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 533
Score = 127 bits (140), Expect = 2e-24
Identities = 160/217 (74%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || ||||| || || || || || || || ||||||||||| |||| ||||||
Sbjct 774 ACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACC 833
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| ||||| || ||| | || | || ||||| || || || || || || ||
Sbjct 834 ATCCTCGAGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTT 893
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | ||| ||| | || | ||||| || ||| || |||||||| |
Sbjct 894 GTCCTG-AATCTTGGCTTTCACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAA 952
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || |||||||| | ||| || ||||| ||||||||
Sbjct 953 TCGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCAT 989
>seq68470
Length=2690
Score = 158 bits (174), Expect = 9e-34
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||| ||||| |||| |||||| || || || || || |||||||||||||||
Sbjct 1117 CCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCA 1058
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || ||||||||||| | ||||| | ||||||||||| |||
Sbjct 1057 AGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGA 998
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || || ||||| | |||| |||||| | || | ||||| || || |||
Sbjct 997 ATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACT 938
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | ||| || ||||| ||||| | ||| |||||||||||||||||
Sbjct 937 TCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 891
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | ||| || || | || || || || |||||||||||||| ||||| ||
Sbjct 889 CCTCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTTTGAATGTTGTAATCGGCC 830
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || | || || || || | |||||||||||||| ||||||||
Sbjct 829 AAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAATCTTTGCTGGTCCGGCGGG 770
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||||||||| || | || ||||| | || | || || ||| || ||
Sbjct 769 ATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTATCAATCGTATCCGAACTCTCCACC 710
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || ||||||| |||||| || || ||||||||
Sbjct 709 TCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 663
Score = 125 bits (138), Expect = 5e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | ||| || || | ||| || || || || || || ||||| ||||| ||
Sbjct 433 CCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCC 374
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| || ||||| ||||| ||||| | || | || ||||| ||||| |||
Sbjct 373 AAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGA 314
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| |||||||| ||| || | ||||| | || | ||||| || || ||
Sbjct 313 ATTCCCTCCTTGTCTTG-AATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 255
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| ||||| ||||||||||| || | |||||| || || ||||||||
Sbjct 254 TTCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 207
Score = 125 bits (138), Expect = 5e-24
Identities = 159/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| ||||| | ||| || ||||| || || |||||||||||||| || | || || |
Sbjct 1333 CGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAAAGTACGGCCA 1274
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || || |||||| | || | || |||||||| || ||||| || || |||
Sbjct 1273 TCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTG 1214
Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| |||| || ||| | || | ||| || || || || || ||||| ||
Sbjct 1213 TCCTG-AATCTTTGCCTTAACATTATCAATAGTATCTGAGCTCTCCACCTCCAGAGTAAT 1155
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || ||||| ||||| || ||||||||||||||
Sbjct 1154 AGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 1119
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | ||| || || | |||||| || || || || || ||||| ||||| ||
Sbjct 205 CCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCC 146
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| || ||||| || || |||||| | || | || ||||| |||||||||
Sbjct 145 AAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGA 86
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| |||||||| | || || || | || | ||||| || || |||
Sbjct 85 ATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAGCTCTCGACT 26
Query 29740 TCAAGAGTTATAGTTTTGCCAGT 29762
|| ||||| ||||||||||| ||
Sbjct 25 TCGAGAGTAATAGTTTTGCCGGT 3
>seq43778
Length=4696
Score = 150 bits (166), Expect = 1e-31
Identities = 165/217 (76%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| |||||||| || || || || || || || ||||| || || || | || ||
Sbjct 3516 ACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCC 3575
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||||||||||||| | |||||||| |||||||| || || || ||||| ||
Sbjct 3576 ATCTTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTT 3635
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | |||||| | || | |||||||| ||| || || | |||||
Sbjct 3636 GTCCTG-AATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCCAAAGTTA 3694
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||| ||||| | |||||| ||||| ||||||||
Sbjct 3695 TAGTTTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 3731
Score = 140 bits (154), Expect = 2e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||| ||||| ||||| || || |||||||||||||| |||| ||| | | |
Sbjct 3061 CGGAGAACCAAGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCA 3120
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || || || ||||||||| | ||||| || ||||| || || ||||| ||||| ||
Sbjct 3121 TCTTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTA 3180
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
||||| | || || ||| | |||| ||||| ||| ||| || || | ||| ||
Sbjct 3181 TCTTGGATCTTGGCCTTCACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATG 3240
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| || || || ||||| ||||||||
Sbjct 3241 GTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3275
Score = 138 bits (152), Expect = 9e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || ||||||||||| || ||||| || || ||||| || || |||
Sbjct 3733 CCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 3792
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || ||||||||||||||| | || | |||||||| || || ||
Sbjct 3793 AGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 3852
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || || || || |||||| | ||||||| | || | ||||| || ||| ||
Sbjct 3853 ATCCCTTCCTTATCCTG-AATTTTGGCTTTGACATTGTCAATGGTGTCCGAGCTTTCCAC 3911
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| | ||| || ||||| || |||||
Sbjct 3912 CTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 3959
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || ||||| || || || || || || || ||||||||||| ||
Sbjct 3961 CCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCG 4020
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || || ||||| |||||| | || | || |||||||| || |||
Sbjct 4021 AGGGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 4080
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | || ||||||| | || | || ||||| ||| ||
Sbjct 4081 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCAACC 4140
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| ||||| ||||| || || | || || ||||| || |||||
Sbjct 4141 TCAAGGGTTATGGTTTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 4187
>seq208088
Length=533
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || || | ||| || |||| || || ||||| || || ||||||||||| || ||
Sbjct 120 TCCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCGGC 179
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| |||||| ||| || ||||||||||||||| | || | |||||||| || || ||
Sbjct 180 AAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGG 239
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
|| || || ||||| || |||||| | ||||||| | || | ||||| || ||| |
Sbjct 240 GATCCCTTCCTTGTCCTG-AATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCA 298
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| || ||||| || ||||| | ||| || ||||| ||||||||
Sbjct 299 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 347
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||| ||||| ||||| || || || |||||||| || |||| ||||| |
Sbjct 361 CGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCA 420
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| |||||||||||||||||| | || | |||||||| || || || || || || ||
Sbjct 421 TCCTCGAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTA 480
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAG 29744
|| || | || ||| ||| | || | |||||||| ||| || |||||
Sbjct 481 TCCTGGATCTTGGCTTTTACATTATCAATGGTGTCAGAGCTTTCGACCTCAAG 533
>seq68153
Length=714
Score = 140 bits (154), Expect = 2e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||| ||||| ||||| |||||| || ||||| || |||||||| |||||||||
Sbjct 287 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCA 346
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || |||||||| | ||||| | ||||| |||||||||
Sbjct 347 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 406
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || ||||| || | || ||||| | || | ||||| || || |||
Sbjct 407 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCAACT 466
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || |||| |||||| || |||||||||||
Sbjct 467 TCGAGTGTGATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 513
Score = 89.7 bits (98), Expect = 4e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||| | ||||| || ||||| || || || || ||||| || | ||||||
Sbjct 526 ACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCC 585
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| |||||||| || || || | |||| || ||||| ||||||||||| || || ||
Sbjct 586 GTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTT 645
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || ||||| | || | ||||| || || ||||| ||||| ||
Sbjct 646 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACTTCGAGAGTAAT 705
Query 29751 AGTTTTGCC 29759
|| |||||
Sbjct 706 GGTCTTGCC 714
>seq43779
Length=2831
Score = 127 bits (140), Expect = 2e-24
Identities = 145/192 (76%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655
|| || || ||||| || || |||| |||||| ||| || ||||||||||||||| |
Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAA 60
Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGT 29714
|| | |||||||| || || || || || || ||||| || ||| || | ||||||| |
Sbjct 61 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTG-AATCTTGGCTTTGACATT 119
Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774
|| | |||||| || ||| || ||||| || |||||||| ||||| | ||| || ||
Sbjct 120 GTCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTAC 179
Query 29775 AAATATCTGCAT 29786
||| ||||||||
Sbjct 180 AAAGATCTGCAT 191
>seq72069
Length=2032
Score = 122 bits (134), Expect = 7e-23
Identities = 112/142 (79%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||| | | ||| ||||| |||||||| || || ||||||||||||||||| ||
Sbjct 327 TCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTGC 268
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || | ||| || | |||||| |||||| | |||| ||| ||||||||||| ||
Sbjct 267 AAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAGG 208
Query 29679 AATACCCTCTTTGTCTTGTAAT 29700
||| || || ||||| ||||||
Sbjct 207 AATGCCTTCCTTGTCCTGTAAT 186
>seq68514
Length=8688
Score = 122 bits (134), Expect = 7e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634
||||| | || ||||| || || || || ||||| ||||| || | |||||| |||
Sbjct 576 AGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCT 517
Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694
|||||||| || || || | |||| | ||||||||||| || || ||||| |||||
Sbjct 516 TCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCC 457
Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754
|| | || ||||| | || | |||||||| || ||||| ||||| || |||
Sbjct 456 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTT 397
Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||| |||| |||||| || || |||||||| ||
Sbjct 396 TTGCCGGTTAGGGTTTTCACGAAGATCTGCATATT 362
Score = 122 bits (134), Expect = 7e-23
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||||||||| ||||| || | ||||| || |||||||| || ||
Sbjct 8185 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 8126
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709
||| | || | | ||||| ||||||||||| ||||| ||||| || | || |||
Sbjct 8125 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 8066
Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769
|| | || | ||||| || || ||||| || || || || ||||| || | ||||
Sbjct 8065 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 8006
Query 29770 TTAACAAATATCTGCATTTT 29789
|| |||||||||||||| ||
Sbjct 8005 TTCACAAATATCTGCATCTT 7986
Score = 118 bits (130), Expect = 8e-22
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||| || ||||| || ||||| ||||||||||| |||| ||| ||
Sbjct 1264 ACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCC 1205
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
|| || || || || ||||| | || | || |||||||| || ||||| || || ||
Sbjct 1204 GTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTT 1145
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| |||| |||||| | || | || |||||| || || || ||||| |
Sbjct 1144 GTCCTG-AATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAA 1086
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|||| || ||||| || || || ||||| || |||||
Sbjct 1085 TAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 1049
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | ||| || || | ||||| || || ||||| || |||||||| || ||
Sbjct 1047 CCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCC 988
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| || || | |||||| || ||| | ||||||||||| ||||| || ||
Sbjct 987 AACGTGCGGCCGTCTTCCAATTGTTTTCCGGCAAAGATCAATCTTTGTTGATCTGGTGGG 928
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | || |||||| | || | || || ||| || ||
Sbjct 927 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCTGAACTCTCCACC 868
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || ||||||| |||||| || || ||||||||
Sbjct 867 TCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 821
Score = 105 bits (116), Expect = 5e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||| || ||||| || ||||||||||||||||| || | || ||
Sbjct 8660 ACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAAAGTACGGCC 8601
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | || | || |||||||| || ||||| || || ||
Sbjct 8600 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTT 8541
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | |||||| | || | || |||||| || || || || || |
Sbjct 8540 ATCCTG-AATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAA 8482
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| ||||| | || || || || ||||||||
Sbjct 8481 TTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||| ||||| ||||| || | ||| || || |||||||| || ||
Sbjct 789 GTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCG 730
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709
|| | |||| || ||||| || || || || ||||| |||||||| | || ||
Sbjct 729 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTC 670
Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769
|| | || | ||||| || || || || || || || || || || || | ||||
Sbjct 669 ACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTT 610
Query 29770 TTAACAAATATCTGCAT 29786
|| || || ||||||||
Sbjct 609 TTGACGAAGATCTGCAT 593
>seq109229
Length=2153
Score = 120 bits (132), Expect = 2e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||| | | ||| ||||| ||||| || || || || |||||||||||||| ||
Sbjct 378 TCCTCCCCTGAGCCTCAGGACCAAGTGAAGTGTTGACTCCTTCTGAATGTTATAATCAGC 437
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
|| || || ||| || | |||||| |||||| | |||||||| ||||||||||| ||
Sbjct 438 AAGAGTACGGCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGCTGATCCGGAGG 497
Query 29679 AATACCCTCTTTGTCTTGTAA 29699
||| || || ||||| |||||
Sbjct 498 AATGCCTTCCTTGTCCTGTAA 518
>seq24834
Length=3164
Score = 107 bits (118), Expect = 1e-18
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|||||||| | | ||||| ||||||||| ||||||||||| ||||| || ||||| ||
Sbjct 460 CCTCCCCTAAGCCTCAGCATCAAATGAAGAGTGGATTCTTTCTGAATATTGTAATCAGCC 401
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCA-ATCTTTGCTGATCCGGCGG 29678
| || ||| ||| ||||| || || || | || | || || |||||||| ||
Sbjct 400 AAAGTACGACCATCTTCGAGCTGCTTTTCAATGAAGATGAGATGCTT-ATGATCCGGGGG 342
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
||| || || |||||||| ||| || | ||||||| | || | |||| ||
Sbjct 341 AATTCCTTCCTTGTCTTG-AATCTTAGCTTTGACATTGTCGATGGTGTTGTTGCTCTCAG 283
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
||||||||||||| || || | |||| |||||| || || || ||||| ||
Sbjct 282 CTTCAAGAGTTATGGTCTTTTCGGTTAGGGTTTTCACTAAGATATGCATCTT 231
>seq68490
Length=1318
Score = 105 bits (116), Expect = 5e-18
Identities = 140/192 (73%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||| || |||||||| ||||| ||||||||||| |||| ||| ||
Sbjct 191 ACGGAGGACGAGATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCC 132
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || ||||| | || | || |||||||| || ||||| || || ||
Sbjct 131 ATCCTCCAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTT 72
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| |||| |||||| | || | || |||||| || || || ||||| |
Sbjct 71 ATCCTG-AATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAA 13
Query 29750 TAGTTTTGCCAG 29761
|||| || ||||
Sbjct 12 TAGTCTTCCCAG 1
>seq71848
Length=4061
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||||| |||| ||| | || ||||||||||| || || ||||||||||| ||
Sbjct 3801 TCCTCCCCTCAGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGC 3860
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| |||||| || || || || ||||| || | || | || ||||| ||||| ||
Sbjct 3861 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGG 3920
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || || ||||| || | || || || | || | ||||| || || ||
Sbjct 3921 GATCCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCAC 3980
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || || || || | || || || || ||||||||
Sbjct 3981 CTCCAGGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 4028
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || ||||| || ||||||||||| ||||| || | || ||
Sbjct 3585 ACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCC 3644
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || ||||| || | || | || ||||| ||||| ||||| ||||||||
Sbjct 3645 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTT 3704
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | ||||| || || || || || || ||
Sbjct 3705 GTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGAT 3764
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || || || || || || || || |||||||||
Sbjct 3765 CGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 3801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 384099532466808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |