Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq43799 161 8e-35 seq68470 158 9e-34 seq43778 150 1e-31 seq208088 149 5e-31 seq68153 140 2e-28 seq43779 127 2e-24 seq72069 122 7e-23 seq68514 122 7e-23 seq109229 120 2e-22 seq24834 107 1e-18 seq68490 105 5e-18 seq71848 91.5 1e-13 >seq43799 Length=2218 Score = 161 bits (178), Expect = 8e-35 Identities = 167/216 (77%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| ||||||||||| || |||||||| || |||| || | | Sbjct 91 CGAAGAACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCA 150 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | || | || |||||||| || || |||||||| ||| Sbjct 151 TCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGTGGGATACCCTCCTTG 210 Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| |||||||| ||| ||| | || | ||||||||| ||| || |||||||| || Sbjct 211 TCTTG-AATTTTTGCTTTCACATTGTCGATGGTGTCAGAACTTTCAACCTCAAGAGTAAT 269 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | |||||| ||||| |||||||| Sbjct 270 TGTTTTTCCAGTGAGGGTTTTCACAAAGATCTGCAT 305 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| || ||||||||||| || ||||| || || ||||| || || ||| Sbjct 535 CCACCCCTGAGACGGAGGACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 594 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || |||||||| || ||| | || | |||||||| || || || Sbjct 595 AGTGTGCGTCCATCCTCTAGTTGTTTACCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 654 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || || || |||||| | ||||||| | || | |||||||| ||| || Sbjct 655 ATCCCTTCCTTATCCTG-AATTTTGGCTTTGACATTGTCAATGGTGTCAGAGCTTTCCAC 713 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| || ||||| | ||| || ||||| |||||||| Sbjct 714 CTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 761 Score = 138 bits (152), Expect = 9e-28 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||||||||| || || || || || || ||||| || || |||| || ||| Sbjct 318 ACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACC 377 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||||||||| ||| | || || || || ||||| || || || ||||| || Sbjct 378 ATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTT 437 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || |||||| | || | |||||||| ||| || || | |||||| Sbjct 438 GTCCTGGATCTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTAT 497 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || ||||| | |||||| ||||| |||||||| Sbjct 498 AGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 533 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || || || || || || ||||||||||| |||| |||||| Sbjct 774 ACGGAGGACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACC 833 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| ||||| || ||| | || | || ||||| || || || || || || || Sbjct 834 ATCCTCGAGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTT 893 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||| ||| | || | ||||| || ||| || |||||||| | Sbjct 894 GTCCTG-AATCTTGGCTTTCACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAA 952 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || |||||||| | ||| || ||||| |||||||| Sbjct 953 TCGTCTTGCCAGTGAGGGTCTTTACAAAGATCTGCAT 989 >seq68470 Length=2690 Score = 158 bits (174), Expect = 9e-34 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| ||||| |||| |||||| || || || || || ||||||||||||||| Sbjct 1117 CCACCCCTCAGGCGCAGAACCAGATGAAGGGTCGACTCCTTCTGGATGTTATAATCCGCA 1058 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || ||||||||||| | ||||| | ||||||||||| ||| Sbjct 1057 AGAGTCCTTCCATCCTCAAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCCGGTGGA 998 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || || ||||| | |||| |||||| | || | ||||| || || ||| Sbjct 997 ATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATTGTGTCTGAGCTCTCAACT 938 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| ||||| | ||| ||||||||||||||||| Sbjct 937 TCCAAAGTAATTGTTTTCCCAGTAAGGGTCTTAACAAATATCTGCAT 891 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | ||| || || | || || || || |||||||||||||| ||||| || Sbjct 889 CCTCCCCTGAGACGAAGAACAAGGTGGAGAGTTGACTCTTTTTGAATGTTGTAATCGGCC 830 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || | || || || || | |||||||||||||| |||||||| Sbjct 829 AAGGTGCGGCCATCTTCCAACTGCTTACCGGCGAAGATCAATCTTTGCTGGTCCGGCGGG 770 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | || ||||| | || | || || ||| || || Sbjct 769 ATCCCCTCTTTGTCCTGGATCTTGGCCTTGACGTTATCAATCGTATCCGAACTCTCCACC 710 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||||| |||||| || || |||||||| Sbjct 709 TCCAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 663 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | ||| || || || || || || ||||| ||||| || Sbjct 433 CCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCC 374 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || ||||| ||||| ||||| | || | || ||||| ||||| ||| Sbjct 373 AAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGA 314 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| ||| || | ||||| | || | ||||| || || || Sbjct 313 ATTCCCTCCTTGTCTTG-AATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGAC 255 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| ||||| ||||||||||| || | |||||| || || |||||||| Sbjct 254 TTCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 207 Score = 125 bits (138), Expect = 5e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || ||||| | ||| || ||||| || || |||||||||||||| || | || || | Sbjct 1333 CGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAAAGTACGGCCA 1274 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || || |||||| | || | || |||||||| || ||||| || || ||| Sbjct 1273 TCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTG 1214 Query 29692 TCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || ||| |||| || ||| | || | ||| || || || || || ||||| || Sbjct 1213 TCCTG-AATCTTTGCCTTAACATTATCAATAGTATCTGAGCTCTCCACCTCCAGAGTAAT 1155 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || ||||| ||||| || |||||||||||||| Sbjct 1154 AGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 1119 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | |||||| || || || || || ||||| ||||| || Sbjct 205 CCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCC 146 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| || ||||| || || |||||| | || | || ||||| ||||||||| Sbjct 145 AAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGA 86 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || || || | || | ||||| || || ||| Sbjct 85 ATTCCCTCCTTGTCTTGGATCTTGGCCTTTACGTTGTCGATGGTGTCCGAGCTCTCGACT 26 Query 29740 TCAAGAGTTATAGTTTTGCCAGT 29762 || ||||| ||||||||||| || Sbjct 25 TCGAGAGTAATAGTTTTGCCGGT 3 >seq43778 Length=4696 Score = 150 bits (166), Expect = 1e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || || || || || || ||||| || || || | || || Sbjct 3516 ACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCTAGAGTACGGCC 3575 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||||||||||||| | |||||||| |||||||| || || || ||||| || Sbjct 3576 ATCTTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCGGGAGGGATGCCCTCCTT 3635 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | |||||| | || | |||||||| ||| || || | ||||| Sbjct 3636 GTCCTG-AATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTTTCAACCTCCAAAGTTA 3694 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||||| ||||| | |||||| ||||| |||||||| Sbjct 3695 TAGTTTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 3731 Score = 140 bits (154), Expect = 2e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| ||||| || || |||||||||||||| |||| ||| | | | Sbjct 3061 CGGAGAACCAAGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCA 3120 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || || || ||||||||| | ||||| || ||||| || || ||||| ||||| || Sbjct 3121 TCTTCAAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTA 3180 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | || || ||| | |||| ||||| ||| ||| || || | ||| || Sbjct 3181 TCTTGGATCTTGGCCTTCACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATG 3240 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || ||||| |||||||| Sbjct 3241 GTCTTCCCAGTCAAAGTCTTCACAAAGATCTGCAT 3275 Score = 138 bits (152), Expect = 9e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| || ||||||||||| || ||||| || || ||||| || || ||| Sbjct 3733 CCACCCCTGAGACGAAGTACCAAATGAAGGGTTGATTCCTTCTGGATGTTGTAGTCTGCA 3792 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || ||||||||||||||| | || | |||||||| || || || Sbjct 3793 AGTGTGCGTCCATCCTCAAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 3852 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || || || || |||||| | ||||||| | || | ||||| || ||| || Sbjct 3853 ATCCCTTCCTTATCCTG-AATTTTGGCTTTGACATTGTCAATGGTGTCCGAGCTTTCCAC 3911 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || || || ||||| | ||| || ||||| || ||||| Sbjct 3912 CTCAAGGGTAATGGTCTTTCCAGTGAGGGTCTTTACAAAGATTTGCAT 3959 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| || ||||| || || || || || || || ||||||||||| || Sbjct 3961 CCACCCCTAAGACGAAGAACCAAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCG 4020 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || ||||| |||||| | || | || |||||||| || ||| Sbjct 4021 AGGGTGCGCCCATCCTCAAGCTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 4080 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||||||| | || | || ||||| ||| || Sbjct 4081 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTATCAATGGTATCAGAGCTTTCAACC 4140 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| ||||| || || | || || ||||| || ||||| Sbjct 4141 TCAAGGGTTATGGTTTTTCCGGTGAGAGTCTTCACAAAGATTTGCAT 4187 >seq208088 Length=533 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || | ||| || |||| || || ||||| || || ||||||||||| || || Sbjct 120 TCCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCGGC 179 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || |||||| ||| || ||||||||||||||| | || | |||||||| || || || Sbjct 180 AAGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGG 239 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 || || || ||||| || |||||| | ||||||| | || | ||||| || ||| | Sbjct 240 GATCCCTTCCTTGTCCTG-AATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCA 298 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| || ||||| || ||||| | ||| || ||||| |||||||| Sbjct 299 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 347 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| ||||| || || || |||||||| || |||| ||||| | Sbjct 361 CGGAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGGCCA 420 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || |||||||||||||||||| | || | |||||||| || || || || || || || Sbjct 421 TCCTCGAGTTGTTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTA 480 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAG 29744 || || | || ||| ||| | || | |||||||| ||| || ||||| Sbjct 481 TCCTGGATCTTGGCTTTTACATTATCAATGGTGTCAGAGCTTTCGACCTCAAG 533 >seq68153 Length=714 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||||| ||||| ||||| |||||| || ||||| || |||||||| ||||||||| Sbjct 287 CCACCCCTCAGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCA 346 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | ||| || || || |||||||| | ||||| | ||||| ||||||||| Sbjct 347 AGCGTCCTTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGA 406 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || ||||| || | || ||||| | || | ||||| || || ||| Sbjct 407 ATCCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCAACT 466 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || |||| |||||| || ||||||||||| Sbjct 467 TCGAGTGTGATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCAT 513 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| ||||| | ||||| || ||||| || || || || ||||| || | |||||| Sbjct 526 ACGAAGCACGAGGTGAAGAGTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCC 585 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || |||||||| || || || | |||| || ||||| ||||||||||| || || || Sbjct 586 GTCCTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTT 645 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||| | || | ||||| || || ||||| ||||| || Sbjct 646 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCAACTTCGAGAGTAAT 705 Query 29751 AGTTTTGCC 29759 || ||||| Sbjct 706 GGTCTTGCC 714 >seq43779 Length=2831 Score = 127 bits (140), Expect = 2e-24 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || || ||||| || || |||| |||||| ||| || ||||||||||||||| | Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCATCCTCAAGTTGTTTGCCAGCAAAA 60 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGT 29714 || | |||||||| || || || || || || ||||| || ||| || | ||||||| | Sbjct 61 ATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTG-AATCTTGGCTTTGACATT 119 Query 29715 TTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAAC 29774 || | |||||| || ||| || ||||| || |||||||| ||||| | ||| || || Sbjct 120 GTCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTAC 179 Query 29775 AAATATCTGCAT 29786 ||| |||||||| Sbjct 180 AAAGATCTGCAT 191 >seq72069 Length=2032 Score = 122 bits (134), Expect = 7e-23 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||| | | ||| ||||| |||||||| || || ||||||||||||||||| || Sbjct 327 TCCTCCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCCTTTTGAATGTTATAATCTGC 268 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | ||| || | |||||| |||||| | |||| ||| ||||||||||| || Sbjct 267 AAGCGTTCTGCCATCTTCCAATTGTTTACCAGCAAAAATCAGTCTCTGCTGATCCGGAGG 208 Query 29679 AATACCCTCTTTGTCTTGTAAT 29700 ||| || || ||||| |||||| Sbjct 207 AATGCCTTCCTTGTCCTGTAAT 186 >seq68514 Length=8688 Score = 122 bits (134), Expect = 7e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 ||||| | || ||||| || || || || ||||| ||||| || | |||||| ||| Sbjct 576 AGCACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCATCT 517 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 |||||||| || || || | |||| | ||||||||||| || || ||||| ||||| Sbjct 516 TCGAGTTGCTTTCCGGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCC 457 Query 29695 TGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTT 29754 || | || ||||| | || | |||||||| || ||||| ||||| || ||| Sbjct 456 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTT 397 Query 29755 TTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||| |||| |||||| || || |||||||| || Sbjct 396 TTGCCGGTTAGGGTTTTCACGAAGATCTGCATATT 362 Score = 122 bits (134), Expect = 7e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||||||||||||||| ||||| || | ||||| || |||||||| || || Sbjct 8185 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 8126 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 ||| | || | | ||||| ||||||||||| ||||| ||||| || | || ||| Sbjct 8125 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 8066 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 || | || | ||||| || || ||||| || || || || ||||| || | |||| Sbjct 8065 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 8006 Query 29770 TTAACAAATATCTGCATTTT 29789 || |||||||||||||| || Sbjct 8005 TTCACAAATATCTGCATCTT 7986 Score = 118 bits (130), Expect = 8e-22 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || ||||| || ||||| ||||||||||| |||| ||| || Sbjct 1264 ACGGAGGACAAGATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCC 1205 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || || || || ||||| | || | || |||||||| || ||||| || || || Sbjct 1204 GTCCTCTAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTT 1145 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| |||| |||||| | || | || |||||| || || || ||||| | Sbjct 1144 GTCCTG-AATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAA 1086 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || ||||| || || || ||||| || ||||| Sbjct 1085 TAGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 1049 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | ||||| || || ||||| || |||||||| || || Sbjct 1047 CCTCCACGGAGACGGAGGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCC 988 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| || || | |||||| || ||| | ||||||||||| ||||| || || Sbjct 987 AACGTGCGGCCGTCTTCCAATTGTTTTCCGGCAAAGATCAATCTTTGTTGATCTGGTGGG 928 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || || |||||||| | || |||||| | || | || || ||| || || Sbjct 927 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCTGAACTCTCCACC 868 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || || ||||||| |||||| || || |||||||| Sbjct 867 TCGAGAGTGATCGTCTTCCCAGTTAGGGTTTTGACGAAGATCTGCAT 821 Score = 105 bits (116), Expect = 5e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || ||||| || ||||||||||||||||| || | || || Sbjct 8660 ACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAAAGTACGGCC 8601 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || |||||| | || | || |||||||| || ||||| || || || Sbjct 8600 ATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTT 8541 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| || | |||||| | || | || |||||| || || || || || | Sbjct 8540 ATCCTG-AATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAA 8482 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | || || || || |||||||| Sbjct 8481 TTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||||||||| ||||| ||||| || | ||| || || |||||||| || || Sbjct 789 GTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGTTGCTTTCCG 730 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 || | |||| || ||||| || || || || ||||| |||||||| | || || Sbjct 729 GCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTC 670 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 || | || | ||||| || || || || || || || || || || || | |||| Sbjct 669 ACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTCCCGGTCAGGGTT 610 Query 29770 TTAACAAATATCTGCAT 29786 || || || |||||||| Sbjct 609 TTGACGAAGATCTGCAT 593 >seq109229 Length=2153 Score = 120 bits (132), Expect = 2e-22 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||| | | ||| ||||| ||||| || || || || |||||||||||||| || Sbjct 378 TCCTCCCCTGAGCCTCAGGACCAAGTGAAGTGTTGACTCCTTCTGAATGTTATAATCAGC 437 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || || ||| || | |||||| |||||| | |||||||| ||||||||||| || Sbjct 438 AAGAGTACGGCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGCTGATCCGGAGG 497 Query 29679 AATACCCTCTTTGTCTTGTAA 29699 ||| || || ||||| ||||| Sbjct 498 AATGCCTTCCTTGTCCTGTAA 518 >seq24834 Length=3164 Score = 107 bits (118), Expect = 1e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 |||||||| | | ||||| ||||||||| ||||||||||| ||||| || ||||| || Sbjct 460 CCTCCCCTAAGCCTCAGCATCAAATGAAGAGTGGATTCTTTCTGAATATTGTAATCAGCC 401 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCA-ATCTTTGCTGATCCGGCGG 29678 | || ||| ||| ||||| || || || | || | || || |||||||| || Sbjct 400 AAAGTACGACCATCTTCGAGCTGCTTTTCAATGAAGATGAGATGCTT-ATGATCCGGGGG 342 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || |||||||| ||| || | ||||||| | || | |||| || Sbjct 341 AATTCCTTCCTTGTCTTG-AATCTTAGCTTTGACATTGTCGATGGTGTTGTTGCTCTCAG 283 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||||||||||||| || || | |||| |||||| || || || ||||| || Sbjct 282 CTTCAAGAGTTATGGTCTTTTCGGTTAGGGTTTTCACTAAGATATGCATCTT 231 >seq68490 Length=1318 Score = 105 bits (116), Expect = 5e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||| || |||||||| ||||| ||||||||||| |||| ||| || Sbjct 191 ACGGAGGACGAGATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGGCC 132 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || || ||||| | || | || |||||||| || ||||| || || || Sbjct 131 ATCCTCCAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTT 72 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || ||| |||| |||||| | || | || |||||| || || || ||||| | Sbjct 71 ATCCTG-AATCTTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAA 13 Query 29750 TAGTTTTGCCAG 29761 |||| || |||| Sbjct 12 TAGTCTTCCCAG 1 >seq71848 Length=4061 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||||||||||| |||| ||| | || ||||||||||| || || ||||||||||| || Sbjct 3801 TCCTCCCCTCAGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGC 3860 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| || || || || ||||| || | || | || ||||| ||||| || Sbjct 3861 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGG 3920 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || ||||| || | || || || | || | ||||| || || || Sbjct 3921 GATCCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCAC 3980 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || || || | || || || || |||||||| Sbjct 3981 CTCCAGGGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCAT 4028 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || ||||| || ||||||||||| ||||| || | || || Sbjct 3585 ACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCC 3644 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || ||||| || | || | || ||||| ||||| ||||| |||||||| Sbjct 3645 ATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTT 3704 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | ||||| || || || || || || || Sbjct 3705 GTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGAT 3764 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || || || || || || ||||||||| Sbjct 3765 CGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCATT 3801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384099532466808