Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq13742 149 6e-31 seq71848 145 7e-30 seq68514 138 1e-27 seq68470 136 4e-27 seq68153 109 5e-19 seq235167 107 2e-18 seq68152 107 2e-18 seq43778 107 2e-18 seq208088 102 8e-17 seq9721 100 3e-16 seq43799 96.9 3e-15 seq43779 96.9 3e-15 seq49145 93.3 4e-14 seq11653 84.2 2e-11 >seq13742 Length=406 Score = 149 bits (164), Expect = 6e-31 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| ||| ||| | ||||||||||||||| || Sbjct 170 GTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCG 229 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || |||||||||||||| || || || ||||||||||| |||||| |||| Sbjct 230 GCGAAGATCAGCCGCTGCTGGTCCGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCCTTG 289 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | |||||| |||| |||| ||| |||||||||| |||| Sbjct 290 ACATTGTCGATCGTGTCGAAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTT 349 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 350 TTCACAAAGATCTGCAT 366 >seq71848 Length=4061 Score = 145 bits (160), Expect = 7e-30 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| || ||||| || || |||||| ||| ||| |||||| ||||||||||| Sbjct 3832 GTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 3891 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||||| ||||||||| || ||||| ||||||||||| |||||| ||| Sbjct 3892 GCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTCGCCTTC 3951 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||||| | |||||| || | ||||| || || ||||||||||| Sbjct 3952 ACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATCGTCTTCCCGGTCAGAGTC 4011 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 4012 TTGACGAAGATCTGCATG 4029 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||||||| | | || | | | ||||||||||||||||| Sbjct 3604 GTGGACTCCTTTTGAATGTTGTAATCGGCGAGAGTCCGGCCA-TCCTCGAGCTGCTTGCC 3662 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||||| ||||||||| ||||| || || || ||||| |||||| ||| Sbjct 3663 GGCGAAGATGAGCCTCTGCTGGTCCGGAGGAATCCCCTCTTTGTCCTGGATCTTGGCCTT 3722 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||||| | |||||| || | ||||| || || ||||||| || Sbjct 3723 CACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGTGATCGTCTTCCCGGTCAACGT 3782 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 3783 CTTGACGAAGATCTGCAT 3800 >seq68514 Length=8688 Score = 138 bits (152), Expect = 1e-27 Identities = 156/207 (75%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGC 133514 ||| | |||||| ||||| || || ||||||||| ||| || || || || ||||| Sbjct 796 ATGCAAGGTGGATTCTTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCG--TCTTCGAGT 739 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | || |||| |||||||||||||||||| || |||||||| |||| Sbjct 738 TGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCGGGAGGGATTCCCTCCTTGTCTTGGATC 679 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | |||||||| | ||| || |||| ||| | || || ||| Sbjct 678 TTGGCCTTCACGTTATCGATCGTGTCGGAGCTCTCGACCTCGAGGGTAATCGTCTTCCCG 619 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| ||||| ||||| ||||||||| Sbjct 618 GTCAGGGTTTTGACGAAGATCTGCATG 592 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| ||| ||| | | | || ||||| ||||| || Sbjct 561 GTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCA-TCTTCGAGTTGCTTTCC 503 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || |||||||| || |||||||| |||||| ||| Sbjct 502 GGCGAAGATCAGACGCTGCTGATCCGGAGGGATCCCCTCCTTGTCCTGGATCTTGGCCTT 443 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | | |||||| |||| |||| ||||||||||| || || Sbjct 442 GACGTTGTCGATGGTGTCAGAGCTCTCCACTTCGAGAGTGATCGTTTTGCCGGTTAGGGT 383 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| |||||||| Sbjct 382 TTTCACGAAGATCTGCAT 365 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 ||||| ||||| || || ||||||||| ||| ||| ||| ||||| ||||| || Sbjct 8185 GTGGATTCTTTTTGAATGTTGTAATCGGCCAAAGTGCGGCCGTCTTCGAGTTGCTTCCCG 8126 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| ||||||||||| || || || || |||||||| |||||| |||| Sbjct 8125 GCAAAGATGAGACGCTGCTGGTCCGGCGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTG 8066 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | |||||| |||| ||||| || |||||||| || ||| Sbjct 8065 ACGTTGTCGATTGTGTCGGAGCTCTCCACTTCGAGGGTGATTGTCTTGCCGGTGAGGGTT 8006 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 8005 TTCACAAATATCTGCAT 7989 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| | | ||| ||||| |||||||| || Sbjct 8413 GTCGACTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCCAGCTGCTTCCCT 8354 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || |||||||| || || ||||| ||||||||||| ||| ||| |||| Sbjct 8353 GCAAAGATCAGGCGCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGGATTTTTGCCTTG 8294 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| ||||| | | ||| || || | |||| || || || ||||| ||| Sbjct 8293 ATGTTGTCAATGGTGTCAGAGCTCTCGACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTT 8234 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 8233 TTGACGAAGATCTGCAT 8217 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||||||||| || || || || ||||| | | || ||| |||||| ||| Sbjct 1252 ATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCAAGGGT--ACGGCCGTCCTCTAGC 1195 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| | ||||||| |||||| || || || || ||||||||||| ||| Sbjct 1194 TGCTTCCCAGCGAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATC 1135 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | |||| || || | |||||| || | || | || || || Sbjct 1134 TTTGCCTTGACATTATCAATTGTATCAGAACTCTCCACCTCCAGAGTAATAGTCTTCCCA 1075 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 |||| ||| || || ||||| |||||| || Sbjct 1074 GTCAAAGTCTTGACAAAAATTTGCATGCCT 1045 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| || || || || ||||| | | || | | | ||||| |||| Sbjct 8648 ATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCTAAAGTACGGCCA-TCCTCAAGCT 8590 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | ||||||| |||||| || || || || |||||||| || |||| Sbjct 8589 GCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGAATCCCTTCCTTATCCTGAATCT 8530 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| || || | |||||| || | ||| | ||||| || | Sbjct 8529 TAGCCTTGACATTGTCAATGGTATCAGAACTCTCCACCTCCAGGGTAATTGTTTTCCCAG 8470 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||||||||| Sbjct 8469 TAAGAGTCTTGACGAAAATCTGCAT 8445 >seq68470 Length=2690 Score = 136 bits (150), Expect = 4e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| |||||||| ||||||||| ||| ||| |||||||||||| Sbjct 410 ATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTG 351 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 || || ||| | || |||| ||||||||| || || || || |||||||| ||||| Sbjct 350 TTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGAATCTT 291 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | ||||||| | ||| || |||| || | ||||||||||| Sbjct 290 CGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCGGT 231 Query 133637 CAGAGTTTTTACGAAAATCTGCATGGCT 133664 ||| ||||| ||||| ||||||||| || Sbjct 230 CAGGGTTTTCACGAAGATCTGCATGCCT 203 Score = 118 bits (130), Expect = 1e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| ||||||||||| ||| ||| ||| || || || Sbjct 638 ATGAAGGGTTGACTCCTTCTGGATATTGTAATCAGCCAAGGTGCGGCCGTCTTCCAGTTG 579 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || |||| ||||||||| || ||||| || |||||||| ||||| Sbjct 578 CTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCTTGAATCTT 519 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | |||||| | | ||| || |||| ||||| || || ||||| Sbjct 518 CGCCTTGACGTTATCGATCGTGTCTGAGCTCTCAACCTCGAGGGTGATCGTCTTCCCGGT 459 Query 133637 CAGAGTTTTTACGAAAATCTGCATGGCT 133664 || ||||| || || ||||||||| || Sbjct 458 TAGGGTTTTGACAAAGATCTGCATGCCT 431 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || ||||||||| ||| ||| |||||||||||| Sbjct 182 ATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGCTG 123 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || | || |||| ||||||||| || || || || |||||||| |||||| Sbjct 122 CTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGGAATTCCCTCCTTGTCTTGGATCTT 63 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | || | ||||| | | ||| || |||| || | ||||||||||| Sbjct 62 GGCCTTTACGTTGTCGATGGTGTCCGAGCTCTCGACTTCGAGAGTAATAGTTTTGCCGGT 3 Query 133637 CA 133638 || Sbjct 2 CA 1 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| || || ||||| | | || | | | ||||| |||| Sbjct 1322 ATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCTAAAGTACGGCCA-TCCTCAAGCT 1264 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | ||||||| |||||| || || || || ||||||||||| |||| Sbjct 1263 GCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCT 1204 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||| | | |||| || || | | |||||| || | || | || || || | Sbjct 1203 TTGCCTTAACATTATCAATAGTATCTGAGCTCTCCACCTCCAGAGTAATAGTCTTCCCAG 1144 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || |||||||| Sbjct 1143 TCAAGGTCTTGACAAATATCTGCAT 1119 >seq68153 Length=714 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || |||||||| | | || | |||||| |||||||| || Sbjct 89 GTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGTACGCCCGTCCTCAAGCTGCTTCCCA 148 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||||| |||||| || || ||||| ||||||||||| ||||| |||| Sbjct 149 GCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCCTTG 208 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| || || | |||||| || | ||| | || || ||||||| || Sbjct 209 ACGTTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTCTTCCCGGTCAATGTC 268 Query 133644 TTTACGAAAATCTGCATG 133661 || || |||||||||||| Sbjct 269 TTGACAAAAATCTGCATG 286 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| || |||||||| | | ||| ||||| ||||||||||| Sbjct 317 GTTGATTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTTCCATCCTCCAGCTGCTTGCCA 376 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || || || ||||||||||| |||||| |||| Sbjct 377 GCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTG 436 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||||| | ||| || |||| |||| || || || || || ||| Sbjct 437 ACGTTGTCGATCGTGTCGGAGCTCTCAACTTCGAGTGTGATCGTCTTTCCCGTTAGGGTT 496 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 497 TTGACGAATATCTGCATG 514 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || || || ||||| |||||||||||| ||| ||| ||||||||| ||||| || Sbjct 545 GTTGATTCCTTCTGGATATTGTAATCGGCCAAGGTGCGGCCGTCCTCGAGTTGCTTTCCG 604 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || |||| ||||||||| || || || ||||||||||| |||||| |||| Sbjct 605 GCGAAGATCAGCCTCTGCTGGTCCGGCGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTG 664 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 | | || | ||||||| | ||| || |||| || | ||| ||||| Sbjct 665 ACGTTGTCGATGGTGTCGGAGCTCTCAACTTCGAGAGTAATGGTCTTGCC 714 >seq235167 Length=544 Score = 107 bits (118), Expect = 2e-18 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 120638 ACAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACG 120697 ||| |||||| || || ||| || || || || ||||| || |||||||| || | Sbjct 101 ACAAGCACGCGAAATCGCAGTGGAGTCCTTCATCTCGCGAGATTAGCTCGTTCGAGAAGG 160 Query 120698 TCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAA 120757 | ||||| ||||| | || | | || | | ||||| ||| || |||||||| | Sbjct 161 TTAGGCCCGGCATTAACCCGCGCTTTTTCAACCAAAATATCGCGCAGAAACTGCCCGAGA 220 Query 120758 AGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGC 120817 |||| | || |||||| |||||| || | || | ||| || || ||| ||| || Sbjct 221 AGAATATCCCTTCCACGCAGGCAAACGCTATCAGTCTCTCCGCGAATGTCTCCGA---GC 277 Query 120818 TGTCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCA 120865 ||||||||| || | |||||| |||||||||||| |||||||||| Sbjct 278 CGTCGATCCAATTTAGGGCCCAATCGGCCTTTTTGGCAACGCACGGCA 325 >seq68152 Length=1216 Score = 107 bits (118), Expect = 2e-18 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || |||||||| | | || ||| |||||| |||||||| | Sbjct 965 GTGGACTCCTTCTGAATGTTGTAATCAGCAAGAGT--ACGGCCGTCCTCAAGCTGCTTCC 1022 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||||| |||||| || || ||||| ||||||||||| ||||| || Sbjct 1023 CAGCGAAGATGAGCCTCTGCTGATCAGGTGGGATCCCTTCCTTGTCCTGAATCTTGGCCT 1082 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | |||||| || | ||| | || || ||||||| | Sbjct 1083 TGACATTGTCAATGGTATCCGAACTCTCCACCTCCAGGGTAATCGTCTTCCCGGTCAATG 1142 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || |||||||||||| Sbjct 1143 TCTTGACAAAAATCTGCATG 1162 >seq43778 Length=4696 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||||| || ||||| ||||| |||||||| || ||| || | ||||| ||||| Sbjct 2616 ATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTG 2675 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| || || |||| | || |||||| || ||||| || ||||||||||| ||| || Sbjct 2676 CTTCCCGGCAAAAATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTT 2735 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | |||| ||||| | ||| || || | ||||| |||||| || || Sbjct 2736 AGCCTTCACATTATCAATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCTGT 2795 Query 133637 CAGAGTTTTTACGAAAATCTGCAT 133660 || || || |||||||||||||| Sbjct 2796 CAATGTCTTCACGAAAATCTGCAT 2819 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 ||||| | ||||| || ||||| || |||||||| | | || | || || ||| Sbjct 2842 AAATGCAATGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATCTTCAAGC 2901 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || |||| | || ||||||||| || || ||||| ||||| || |||| Sbjct 2902 TGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCTTGGATC 2961 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| |||||| | ||| || || | |||| ||||| || Sbjct 2962 TTGGCCTTCACATTATCAATCGTGTCCGAACTCTCTACCTCCAGAGTGATTGTTTTTCCA 3021 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || ||||| |||||| Sbjct 3022 GTGAGAGTCTTCACAAAAATTTGCATG 3048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || || ||||| | | || || | || || || Sbjct 3070 AAGTGAAGGGTGGACTCCTTCTGAATGTTATAATCTGCAAGGGTCCTACCA-TCTTCAAG 3128 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| | || ||||||||||||||| ||||| ||||| || ||| Sbjct 3129 CTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCGGGAGGAATGCCCTCCTTATCTTGGAT 3188 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||| | ||||| || | |||| ||| || || Sbjct 3189 CTTGGCCTTCACATTATCTATGGTGTCTGAACTTTCCACCTCCAAAGTGATGGTCTTCCC 3248 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || || || |||||||| Sbjct 3249 AGTCAAAGTCTTCACAAAGATCTGCAT 3275 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| |||||||| ||| | | || || || |||||||| || Sbjct 3307 GTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCAAGCTGCTTACCA 3366 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||||||| || ||||||||||||||||| ||| || |||| Sbjct 3367 GCAAAGATAAGCCTCTGCTGGTCAGGCGGGATGCCTTCCTTGTC-TTGAATCTTAGCTTT 3425 Query 133584 AGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | | |||| || || | ||| || || | ||| | ||| ||||| || ||||| Sbjct 3426 AACATTGTCAATAGTATCCGAACTCTCAACTTCTAAGGTAATGGTCTTGCCAGTAAGAGT 3485 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 3486 CTTAACAAAGATTTGCAT 3503 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||| ||||| || || |||||| | | ||| | ||||| ||| Sbjct 3982 AAGTGCAGGGTCGACTCCTTCTGGATGTTATAATCGGCGAGGGTGCGCCCATCCTCAAGC 4041 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || || | || |||| |||||| || || || || ||||||||||| |||| Sbjct 4042 TGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGGATC 4101 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || |||| | |||| || || | | || || || | ||| | |||||| ||| Sbjct 4102 TTAGCTTTGACATTATCAATGGTATCAGAGCTTTCAACCTCAAGGGTTATGGTTTTTCCG 4161 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || ||||| Sbjct 4162 GTGAGAGTCTTCACAAAGATTTGCAT 4187 >seq208088 Length=533 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || || || ||| | | ||| | | | ||||| || || ||||| Sbjct 151 GTGGACTCCTTCTGAATGTTATAGTCGGCAAGGGTGCGGCCA-TCCTCAAGTTGTTTGCC 209 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || |||| |||| |||||||| || ||||| ||||||||||| ||| ||| || | Sbjct 210 AGCAAAAATAAGCCTTTGCTGGTCTGGTGGGATCCCTTCCTTGTC-CTGAATTTTGGCTT 268 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| | ||||| || | ||||| || || || || || | Sbjct 269 TGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTCTTTCCAGTGAGGG 328 Query 133642 TTTTTACGAAAATCTGCAT 133660 | ||||| || |||||||| Sbjct 329 TCTTTACAAAGATCTGCAT 347 >seq9721 Length=1405 Score = 100 bits (110), Expect = 3e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || |||||||| ||||| | || || ||||||||||| ||||| Sbjct 269 GCTTTCCGACGAAGATCAGCCGCTGGTGGTCCAGTGGAATCCCTTCCTTGTCCTGGATCT 210 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | |||||||| | |||||| |||| |||| ||| ||||||| Sbjct 209 TAGCCTTGACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGAGTGATGGTCTTGCCGG 150 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| |||||| || || |||||||| Sbjct 149 TCAAAGTTTTCACAAAGATCTGCAT 125 >seq43799 Length=2218 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || || ||||| | | ||| ||| | |||||||| Sbjct 784 AAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGCAAGTGTGCGACCA-TCCTCGAG 842 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | || |||| ||||||||| || ||||| ||||||||||| || Sbjct 843 CTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCCTTGTCCTGAAT 902 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || | | |||| ||||||| | ||||| || | || | || ||||| Sbjct 903 CTTGGCTTTCACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGAGTAATCGTCTTGCC 962 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || |||||||| Sbjct 963 AGTGAGGGTCTTTACAAAGATCTGCAT 989 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| || || ||||| ||||| || || | | ||| ||| | |||||||| Sbjct 1012 AAGTGGAGGGTTGATTCCTTCTGGATATTATAGTCAGCAAGTGTGCGACCA-TCCTCGAG 1070 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || | || |||| |||||| || || ||||| ||||||||||| ||| Sbjct 1071 CTGTTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATCCCTTCCTTGTCCTGGAT 1130 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || | | |||| ||||||| | || || || | ||| | || ||||| Sbjct 1131 CTTGGCTTTTACATTATCAATGGTGTCGGAGCTTTCAACCTCAAGGGTTATTGTCTTGCC 1190 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| |||||||| || || || ||||| Sbjct 1191 GGTGAGAGTTTTCACAAAGATTTGCAT 1217 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||| ||||| ||||| || ||||| || | | || ||| | || || || Sbjct 328 AAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTACGACCA-TCTTCAAG 386 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || ||||| || | || | || ||| || || || |||||||| |||||||| ||| Sbjct 387 TTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGGATGCCCTCCTTGTCCTGGAT 446 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||| | | || || || | || | || || || Sbjct 447 CTTGGCCTTGACATTGTCGATCGTGTCAGAGCTTTCAACCTCCAAAGTTATAGTCTTACC 506 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| ||||| || |||||||||||| Sbjct 507 AGTCAGGGTTTTCACAAAAATCTGCATG 534 >seq43779 Length=2831 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 133470 TCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 || ||||| || ||||| || | | ||| ||| | ||||| || || ||||| || | Sbjct 1 TCCTTCTGGATGTTGTAGTCTGCAAGTGTGCGACCA-TCCTCAAGTTGTTTGCCAGCAAA 59 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| |||| |||||||| || ||||| ||||||||||| ||||| |||| | Sbjct 60 AATAAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTGGCTTTGACATT 119 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 |||| ||||||| | ||||| || | ||||| ||||| || || || || ||||| Sbjct 120 GTCAATAGTGTCGGAGCTTTCCACCTCAAGGGTGATAGTTTTTCCAGTGAGGGTCTTTAC 179 Query 133649 GAAAATCTGCAT 133660 || |||||||| Sbjct 180 AAAGATCTGCAT 191 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || || || || | | ||| ||| | ||||||||||| || || Sbjct 223 GTGGACTCCTTCTGGATGTTATAGTCAGCAAGAGTGCGACCA-TCCTCGAGCTGTTTACC 281 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| | |||||||| || ||||| |||||||| || |||||| || Sbjct 282 GGCAAAGATGAGTCTTTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCTTT 341 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| ||||| | | || || || | ||| | ||| |||||||| ||||| Sbjct 342 TACGTTATCAATGGTGTCAGAGCTTTCGACCTCAAGGGTTATGGTCTTGCCGGTGAGAGT 401 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 402 CTTCACAAAGATTTGCAT 419 >seq49145 Length=1022 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| ||| ||| | ||||||||||||||| || Sbjct 842 GTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCGAGCTGCTTTCCA 783 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| | || |||||||||||||| || || || ||||||||||| Sbjct 782 GCGAAGATCAGCCGCTGCTGGTCTGGTGGAATCCCTTCCTTGTC 739 >seq11653 Length=224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || |||||||| ||| ||| | |||||| |||||||| || Sbjct 156 GTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCTCGTCCTCAAGCTGCTTTCCG 97 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || ||||||||||| || || || ||||| ||||| |||||| |||| Sbjct 96 GCGAAGATCAGTCGCTGCTGGTCCGGTGGAATCCCTTCGTTGTCCTGGATCTTAGCCTTG 37 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGA 133617 | | | | |||| || | |||||| |||| Sbjct 36 ACATTGTTGATCGTGGCGAAGCTCTCCACCTCGA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481979674253120