Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq68470 158 3e-33 seq43799 138 3e-27 seq68514 132 1e-25 seq68153 131 4e-25 seq71848 129 1e-24 seq13742 120 7e-22 seq43778 111 4e-19 seq41899 100 7e-16 seq68490 95.1 3e-14 seq11653 95.1 3e-14 seq43779 93.3 1e-13 seq43798 89.7 1e-12 seq24834 87.8 4e-12 >seq68470 Length=2690 Score = 158 bits (174), Expect = 3e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || ||||||||| |||| ||||| ||||| || Sbjct 666 CAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAGGTGGAGAGTTCGGAT 725 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || ||||| || || ||||||| ||| Sbjct 726 ACGATTGATAACGTCAAGGCCAAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAGCAA 785 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||||||||| ||||||||||||||||| | || ||||||||||||||| | Sbjct 786 AGATTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACAACATT 845 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 || |||||||| ||||| ||||||||| Sbjct 846 CAAAAAGAGTCAACTCTCCACCTTGTT 872 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| || ||| | ||||| || || || ||||| |||| |||||| Sbjct 3 ACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTCGGACACCATCGACAACGTAAAGGCC 62 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || || |||||| ||||||| || || |||||||| || |||||| Sbjct 63 AAGATCCAAGACAAGGAGGGAATTCCGCCGGACCAGCAGAGGCTTATCTTTGCTGGAAAG 122 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || || || | || ||||||||||||||| ||||||| ||||| || ||||| Sbjct 123 CAGCTCGAGGACGGCCGCACCTTGGCCGATTACAACATCCAGAAGGAGTCAACCCTTCAT 182 Query 206374 CTTGT 206378 ||||| Sbjct 183 CTTGT 187 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || || || || ||||| || ||||||||||| || || || ||| Sbjct 894 CAGATATTTGTTAAGACCCTTACTGGGAAAACAATTACTTTGGAAGTTGAGAGCTCAGAC 953 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| ||| || ||||| || ||||||||| ||||| || Sbjct 954 ACAATTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGATCAGCAG 1013 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || || ||| | || |||||||||||| | || ||||| ||| || Sbjct 1014 CGTTTGATCTTCGCTGGCAAACAGCTTGAGGATGGAAGGACTCTTGCGGATTATAACATC 1073 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| ||||| || ||||| || ||| || Sbjct 1074 CAGAAGGAGTCGACCCTTCATCTGGTTCTG 1103 Score = 125 bits (138), Expect = 2e-23 Identities = 144/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||| || ||| | ||||| || || || ||||| |||| Sbjct 222 AAAACCCTGACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAAC 281 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || || |||||| |||||| || || ||||||||| Sbjct 282 GTCAAGGCGAAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAGCAGAGGCTTATCTTC 341 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| ||| | || || || | || ||||||||||||||| | ||||| ||||| Sbjct 342 GCTGGAAAACAGCTCGAGGACGGCCGCACCTTGGCCGATTACAACATACAGAAGGAGTCA 401 Query 206365 ACTCTTCACCTTGT 206378 || || || ||||| Sbjct 402 ACCCTCCATCTTGT 415 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| || || || || |||||||| | || || || || || ||| Sbjct 438 CAGATCTTTGTCAAAACCCTAACCGGGAAGACGATCACCCTCGAGGTTGAGAGCTCAGAC 497 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||||||||| || || ||||| |||||| || Sbjct 498 ACGATCGATAACGTCAAGGCGAAGATTCAAGACAAGGAGGGAATCCCCCCGGACCAGCAG 557 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || ||||| ||||||| || | || ||||| |||||||| || Sbjct 558 AGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGCACCTTGGCTGATTACAATATC 617 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || ||||| || ||| | || || || Sbjct 618 CAGAAGGAGTCAACCCTTCATCTCGTTCTCAGGCTCCG 655 >seq43799 Length=2218 Score = 138 bits (152), Expect = 3e-27 Identities = 157/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| ||||| |||||||| || ||| | || || |||||||||||| Sbjct 302 CAGATCTTTGTGAAAACCCTCACTGGAAAAACAATTACTCTTGAGGTTGAAAGTTCTGAC 243 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||||||||| |||||||| || || || || || || || Sbjct 242 ACCATCGACAATGTGAAAGCAAAA-ATTCAAGACAAGGAGGGTATCCCACCAGATCAGCA 184 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || || || || ||||||||| | ||||||||||||||| | || || || ||| | Sbjct 183 GAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAACAT 124 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||||||| || ||||||||| | ||| Sbjct 123 CCAGAAAGAATCCACTCTTCACTTGGTT 96 Score = 93.3 bits (102), Expect = 1e-13 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 204763 AACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTC 204822 ||| | ||||||||| || |||||||||| |||||||| || | ||||||||||||||| Sbjct 96 AACCAAGTGAAGAGTGGATTCTTTCTGGATGTTATAGTCTGCAAGAGTCCTTCCATCTTC 155 Query 204823 CAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||||| || || || |||| || ||| Sbjct 156 AAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGA 189 >seq68514 Length=8688 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||| ||||| || || || ||||| | |||||||| || || ||| Sbjct 7992 CAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGCTCCGAC 8051 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| ||||| || || || || |||||| ||||||| || Sbjct 8052 ACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGACCAGCAG 8111 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| ||||| ||||| | ||||| || | |||||||||||||||||| | Sbjct 8112 CGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTACAACATT 8171 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| || ||| | || ||||| | || ||||| Sbjct 8172 CAAAAAGAATCCACTTTGCATCTTGTCCTCAGGCTTCG 8209 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || |||||||||||| | |||||||| || |||||||| |||| Sbjct 380 AAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGCTCTGACACCATCGACAAC 439 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || ||||| || | || |||||| Sbjct 440 GTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGATCAGCAGCGTCTGATCTTC 499 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||||||||| | |||||||| | || ||||||||||||||| ||||||| ||||| Sbjct 500 GCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTACAACATCCAGAAGGAGTCA 559 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 560 ACGCTCCACCTCGT 573 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || ||||||||| | || ||||| ||||| || Sbjct 824 CAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTCAGAT 883 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || ||||| || || || ||| Sbjct 884 ACGATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAACAA 943 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | ||||| |||||||| || |||||||| || | || ||||| || || ||| || Sbjct 944 AGATTGATCTTTGCCGGAAAACAATTGGAAGACGGCCGCACGTTGGCTGACTATAACATC 1003 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| |||||||||||||| Sbjct 1004 CAGAAAGAGTCAACTCTTCACCTTGT 1029 Score = 125 bits (138), Expect = 2e-23 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || ||||| ||||||||| ||||||| || || |||||| Sbjct 8220 CAGATCTTCGTCAAAACCCTGACGGGAAAGACGATCACTCTGGAAGTCGAGAGCTCTGAC 8279 Query 206233 ACAGTCGA-ATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || | || || |||||| || || || || ||||| || || || || Sbjct 8280 ACCATTGACAACATCAAGGCAAAA-ATCCAGGACAAGGAAGGGATCCCACCTGATCAGCA 8338 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || ||||| || || |||||| |||| ||||||||||| | || ||||||||| | Sbjct 8339 GCGCCTGATCTTTGCAGGGAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAACAT 8398 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| ||||| |||||||| || || ||| Sbjct 8399 TCAGAAGGAGTCGACTCTTCATCTGGTGTTG 8429 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || ||||| || | || || || || || ||| Sbjct 596 CAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAGCTCCGAC 655 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || ||||| || ||| || Sbjct 656 ACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGACCAGCAG 715 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||||||||| | ||||| || |||| ||||||||||||||| || Sbjct 716 AGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTACAACATC 775 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||| || || | || ||||| Sbjct 776 CAAAAAGAATCCACCTTGCATCTTGT 801 Score = 96.9 bits (106), Expect = 8e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||||||||| ||||||||||||| |||||||||||||| || | || |||||| Sbjct 1029 ACAAGGTGAAGAGTTGACTCTTTCTGGATGTTATAGTCAGCCAACGTGCGGCCGTCTTCC 970 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | || |||||||| ||||| | | ||||||| Sbjct 969 AATTGTTTTCCGGCAAAGATCAATCTTTGTTGA 937 >seq68153 Length=714 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| |||||| || || ||||| |||||||| | ||||| || || || ||| Sbjct 510 CAGATATTCGTCAAAACCCTAACGGGAAAGACGATCACACTCGAAGTTGAGAGCTCCGAC 451 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||| ||| ||||||| || Sbjct 450 ACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAG 391 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || |||||| |||| ||||||||||| | || ||||||||| | Sbjct 390 CGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAACATT 331 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| || || |||||||| || || ||| Sbjct 330 CAGAAGGAATCAACTCTTCATCTGGTGTTG 301 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 206197 GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAG 206256 || || || || ||| | ||||| || || || ||||| |||| || ||| ||| Sbjct 714 GGCAAGACCATTACTCTCGAAGTTGAGAGCTCCGACACCATCGACAACGTCAAGGCCAAG 655 Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316 || || || || ||||| ||| ||||||| || || || ||||||||||||||||| Sbjct 654 ATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAA 595 Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT 206376 | || || || | || |||||||||||||| ||||||| || || ||||||||||| Sbjct 594 CTCGAGGACGGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTTCACCTC 535 Query 206377 GT 206378 || Sbjct 534 GT 533 >seq71848 Length=4061 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||| | || || || |||||||| |||| ||||| || || ||| Sbjct 3797 CAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGAC 3738 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || ||||| || ||| |||||| || Sbjct 3737 ACGATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAGCAG 3678 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| |||||| | || ||||| ||||| | |||||||||||| | Sbjct 3677 AGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAACATT 3618 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| ||||| |||||||| Sbjct 3617 CAAAAGGAGTCCACTCTCCACCTTGT 3592 Score = 118 bits (130), Expect = 2e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || |||||||| |||| ||||| || || ||| Sbjct 4025 CAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCCGAC 3966 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||| || |||||| || Sbjct 3965 ACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAGCAG 3906 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||||||||| |||||| |||| || || | || |||||||||| ||| || Sbjct 3905 AGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGATTATAACATC 3846 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382 ||||| || || || || |||||||| ||| Sbjct 3845 CAGAAGGAATCCACGCTCCACCTTGTGTTG 3816 >seq13742 Length=406 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| | || || || || |||||| | || ||||| || | ||| Sbjct 363 CAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTTCGAC 304 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || ||||| ||| |||||| || Sbjct 303 ACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAG 244 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||||||||||||| | || || || | || ||||| ||||||||| || Sbjct 243 CGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAACATC 184 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| |||||||| Sbjct 183 CAGAAGGAGTCGACTCTCCACCTTGT 158 Score = 86.0 bits (94), Expect = 1e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| ||||| ||||| ||||||| || || || ||||| || | || || || Sbjct 158 ACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGCCAAGGTGCGCCCGTCCTCG 217 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 |||||||||||||||||||| ||||| || || Sbjct 218 AGCTGCTTTCCGGCGAAGATCAGCCGCTGCTG 249 >seq43778 Length=4696 Score = 111 bits (122), Expect = 4e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || || || ||||| || ||||| || || | || Sbjct 3488 AAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCGGATACTATTGACAAT 3429 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||||||||| || ||||| || ||| ||| || || |||||||| Sbjct 3428 GTTAAAGCTAA-GATTCAAGACAAGGAAGGCATCCCGCCTGACCAGCAGAGGCTTATCTT 3370 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| | |||||||||||||| | ||||| ||||| | ||||| ||||| Sbjct 3369 TGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTCGCCGACTACAATATTCAGAAGGAGTC 3310 Query 206364 TACTCTTCAC 206373 ||||||||| Sbjct 3309 CACTCTTCAC 3300 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || || || ||||||||||| ||||||||||| ||| Sbjct 3272 CAGATCTTTGTGAAGACTTTGACTGGGAAGACCATCACTTTGGAGGTGGAAAGTTCAGAC 3213 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || || || ||| || ||| || Sbjct 3212 ACCATAGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGACCAGCAG 3153 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | || || || || |||||| | |||||||| ||||| | || ||||| ||| | Sbjct 3152 AGGTTGATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACCCTTGCAGATTATAACATT 3093 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| || |||||| | ||| | | ||||| Sbjct 3092 CAGAAGGAGTCCACCCTTCACTTGGTTCTCCGCCTTCG 3055 Score = 100 bits (110), Expect = 7e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||||||||| ||||| |||| || || ||||| ||||| | || || ||| Sbjct 2795 ACAGGAAAAACCATCACCCTGGAGGTTGAGAGTTCAGACACCATTGATAATGTGAAGGCT 2736 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || || || || ||||| ||| || || || || | || || ||||| ||| Sbjct 2735 AAAATCCAGGACAAGGAAGGGATTCCTCCAGATCAGCAGAGGTTGATTTTTGCCGGGAAG 2676 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||| ||||| | |||||||| || ||||| ||||||| ||||||||| | || Sbjct 2675 CAGCTGGAGGATGGGCGTACTTTGGCTGACTACAATATCCAGAAGGAGTCTACTTTACAT 2616 Query 206374 CTTGT 206378 ||||| Sbjct 2615 CTTGT 2611 Score = 87.8 bits (96), Expect = 4e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| || | ||||||||| ||||||| ||| |||||||||||||| | ||||| ||| Sbjct 2611 ACAAGATGTAAAGTAGACTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCC 2670 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||| ||||| || || | || || ||| Sbjct 2671 AGCTGCTTCCCGGCAAAAATCAACCTCTGCTGA 2703 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 204769 GTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 204828 ||||||||| ||||| ||||| | ||| ||||| || | |||||||||||||| ||||| Sbjct 3300 GTGAAGAGTGGACTCCTTCTGAATATTGTAGTCGGCGAGGGTCCTTCCATCTTCAAGCTG 3359 Query 204829 CTTTCCGGCGAAGATAAGCC 204848 ||| || || |||||||||| Sbjct 3360 CTTACCAGCAAAGATAAGCC 3379 >seq41899 Length=578 Score = 100 bits (110), Expect = 7e-16 Identities = 147/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||| || || ||||| |||||| ||| ||||| || || ||| Sbjct 4 CAGATCTTCGTCAAGACGTCGACCGGGAAAACCATCACTCAGGAGGTGGAGAGCTCCGAC 63 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| ||||| | || Sbjct 64 ACGATCGACAACGTGAAGACGAAGATTCAGGACAAGGAGGGGATTCCGCCGGGCCAGCAG 123 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTG-GAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 || || ||||||||| | ||||| || || || || ||||| |||||||||||| | Sbjct 124 AGGCTCATCTTCGCCAGCAAGCAATTTTGAGGACGGCTGGACTCGCGCCGATTACAACAT 183 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| ||||| ||| |||| Sbjct 184 TCAAAAGGAGTCCACTCTCCACTTTGT 210 >seq68490 Length=1318 Score = 95.1 bits (104), Expect = 3e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 206197 GGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAG 206256 || || || || ||| |||| ||||| |||||||| ||| | || || ||| |||| Sbjct 3 GGGAAGACTATTACTCTGGAGGTGGAGAGTTCTGATACAATTGATAATGTCAAGGCAAAG 62 Query 206257 ATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAG 206316 ||||| || || ||||| ||| || || || || ||||||||||| || |||||| Sbjct 63 ATTCAGGATAAGGAAGGGATTCCACCAGATCAGCAGAGGCTTATCTTCGCTGGGAAGCAG 122 Query 206317 TTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTT 206376 |||| ||||| | || | || ||||| ||| |||| || || || || || || || Sbjct 123 CTGGAGGATGGCCGTACCCTTGCTGATTATAACATCCAAAAGGAATCCACCCTCCATCTC 182 Query 206377 GT 206378 || Sbjct 183 GT 184 >seq11653 Length=224 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || ||||| ||| |||||| || |||| ||||||||||||||| Sbjct 44 AAGATCCAGGACAACGAAGGGATTCCACCGGACCAGCAGCGACTGATCTTCGCCGGAAAG 103 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || || | | || ||||| ||||||||| ||||||| ||||| ||||| ||| Sbjct 104 CAGCTTGAGGACGAGCGCACCTTGGCGGATTACAACATCCAGAAGGAGTCGACTCTCCAC 163 Query 206374 CTTGT 206378 || || Sbjct 164 CTCGT 168 >seq43779 Length=2831 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 206215 GAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGA 206274 || || || ||||| |||||| | || || ||| ||||| || || || || || Sbjct 2831 GAGGTTGAGAGTTCGGACACAATTGACAATGTTAAGGCTAAGATCCAGGATAAGGAGGGG 2772 Query 206275 ATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACT 206334 ||| || ||| || || | ||||| || |||||||| | || |||||||||||| Sbjct 2771 ATTCCACCAGACCAGCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACT 2712 Query 206335 TTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 | || ||||||||| ||||||| ||||| ||||| || ||||| Sbjct 2711 CTTGCTGATTACAACATCCAGAAGGAGTCCACTCTGCATCTTGT 2668 >seq43798 Length=861 Score = 89.7 bits (98), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 206215 GAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGA 206274 || || || ||||| |||||| | || || ||| ||||| || || || || || Sbjct 861 GAGGTTGAGAGTTCGGACACAATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAGGGG 802 Query 206275 ATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACT 206334 ||| || ||| || || | ||||| || |||||||| | || |||||||||||| Sbjct 801 ATTCCACCCGACCAGCAGAGGTTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACT 742 Query 206335 TTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 | || ||||||||| ||||||| ||||| || || || ||||| Sbjct 741 CTTGCTGATTACAACATCCAGAAGGAGTCCACCCTGCATCTTGT 698 >seq24834 Length=3164 Score = 87.8 bits (96), Expect = 4e-12 Identities = 138/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || | ||| || || ||| | |||| || || |||| |||| Sbjct 249 AAAACCCTAACCGAAAAGACCATAACTCTTGAAGCTGAGAGCAACAACACCATCGACAAT 308 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA-AAG--ACTTAT 206300 || ||||| || ||||||||| || ||||||||| ||||| ||| ||| || || Sbjct 309 GTCAAAGCTAA-GATTCAAGACAAGGAAGGAATTCCCCCGGA---TCATAAGCATCTCAT 364 Query 206301 CTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGA 206360 |||| | ||||||| | |||||||| | |||||||| |||||||| | |||||||| Sbjct 365 CTTCATTGAAAAGCAGCTCGAAGATGGTCGTACTTTGGCTGATTACAATATTCAGAAAGA 424 Query 206361 GTCTACTCTTCA 206372 || |||||||| Sbjct 425 ATCCACTCTTCA 436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178209595863448