Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq90717 86.0 7e-12
seq101345 84.2 2e-11
>seq90717
Length=2135
Score = 86.0 bits (94), Expect = 7e-12
Identities = 67/79 (85%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 79620 CAGACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-A 79678
|| |||||| ||| |||| | || |||| ||||||||||||||||||||||||||| |
Sbjct 1817 CAAACTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAA 1876
Query 79679 CCAATTGAGCTACGAAAGC 79697
|||| |||||||||| |||
Sbjct 1877 CCAACTGAGCTACGAGAGC 1895
>seq101345
Length=1040
Score = 84.2 bits (92), Expect = 2e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683
|||| ||| |||| | || |||| ||||||||||||||||||||||||||| |||||
Sbjct 841 TGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 900
Query 79684 TGAGCTACGAAAGCAA 79699
|||||||||| |||||
Sbjct 901 TGAGCTACGAGAGCAA 916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545584694382400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |