Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq68470 147 2e-30 seq43799 147 2e-30 seq68153 138 1e-27 seq68514 131 1e-25 seq13742 116 3e-21 seq43778 113 4e-20 seq68152 105 6e-18 seq71848 102 7e-17 seq9721 87.8 2e-12 seq41899 86.0 5e-12 seq208088 84.2 2e-11 >seq68470 Length=2690 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| || || || || || || | |||||| | ||||| || || Sbjct 890 CATGCAGATATTTGTTAAGACCCTTACTGGGAAAACAATTACTTTGGAAGTTGAGAGCTC 949 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | ||||| |||||| ||||| || ||||| || ||||| ||||| Sbjct 950 AGACACAATTGACAATGTCAAGGCAAAAATCCAAGATAAGGAAGGAATTCCACCGGATCA 1009 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||| |||||||| | || || | ||| || | ||||| || Sbjct 1010 GCAGCGTTTGATCTTCGCTGGCAAACAGCTTGAGGATGGAAGGACTCTTGCGGATTATAA 1069 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||||||| | ||| ||||| |||| || ||||||| || Sbjct 1070 CATCCAGAAGGAGTCGACCCTTCATCTGGTTCTGCGCCTGAGGGGTGGTAT 1120 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| ||||||||||| |||||||||| ||||| || || Sbjct 206 CATGCAGATCTTCGTGAAAACCCTGACCGGCAAAACTATTACTCTCGAAGTCGAGAGCTC 265 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| || ||||||||||| || || || || || || || Sbjct 266 CGACACCATCGACAACGTCAAGGCGAAGATTCAAGACAAGGAGGGAATTCCCCCGGACCA 325 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || ||||| | || ||| | ||| | |||||||||| Sbjct 326 GCAGAGGCTTATCTTCGCTGGAAAACAGCTCGAGGACGGCCGCACCTTGGCCGATTACAA 385 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | ||| | || | ||| | || || ||||| Sbjct 386 CATACAGAAGGAGTCAACCCTCCATCTTGTCCTTCGTCTACGCGGAGGCAT 436 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || || || ||| | || ||||| || ||||| || Sbjct 663 ATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTGGAGGTGGAGAGTTCG 722 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||| | ||||| || || || |||||||| || || || || || || Sbjct 723 GATACGATTGATAACGTCAAGGCCAAGATCCAGGACAAAGAGGGGATCCCGCCGGACCAG 782 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | |||||| || || |||||||| | ||| | ||||||||||| Sbjct 783 CAAAGATTGATCTTCGCCGGTAAGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACAAC 842 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| ||||| || | || | ||| | ||| | |||| ||||| Sbjct 843 ATTCAAAAAGAGTCAACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCAT 892 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| || ||||| ||| | || || || || || || || Sbjct 434 CATGCAGATCTTTGTCAAAACCCTAACCGGGAAGACGATCACCCTCGAGGTTGAGAGCTC 493 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | ||||| || ||||||||||| || || || || || || || Sbjct 494 AGACACGATCGATAACGTCAAGGCGAAGATTCAAGACAAGGAGGGAATCCCCCCGGACCA 553 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | || ||||| ||| |||||||| | ||| | | |||||||| Sbjct 554 GCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGACGGCCGCACCTTGGCTGATTACAA 613 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTT 27197 || || |||||||| ||| | ||| | ||| Sbjct 614 TATCCAGAAGGAGTCAACCCTTCATCTCGTT 644 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| || || |||| || ||| |||||||||| || ||||| || Sbjct 1119 ATGCAGATATTTGTCAAGACCTTGACTGGGAAGACTATTACTCTGGAGGTGGAGAGCTCA 1178 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1179 GATACTATTGATAATGTTAAGGCAAAGATTCAGGACAAGGAAGGGATTCCACCAGATCAG 1238 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | || || | || | | ||||| ||| Sbjct 1239 CAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAGGATGGCCGTACTTTAGCTGATTATAAC 1298 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| |||||||| ||| | ||| | || | || | || ||||| Sbjct 1299 ATTCAGAAGGAGTCCACCCTCCATCTTGTGCTCCGCCTTCGTGGTGG 1345 >seq43799 Length=2218 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| ||||| || ||| |||| ||| | || || ||| || Sbjct 534 CATGCAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTC 475 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| |||| || | ||||| || || || ||||| || ||||| ||||| ||||| Sbjct 474 TGACACGATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCTGATCA 415 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||| | ||||| | |||||||||||| | ||||| || || || | || ||||| Sbjct 414 ACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTACTCTTGCTGACTACAA 355 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | |||||||| | ||| | || ||||| || Sbjct 354 CATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTCGTCTCCGTGGTGGTAT 304 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||||||| || || || |||||| | ||||||||||| |||||| ||| Sbjct 989 ATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGAAAGCTCC 930 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| || ||||| ||||| ||||| || ||||| || || Sbjct 929 GACACCATTGACAATGTGAAAGCCAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAG 870 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| ||||| | || || || || || | ||||| ||| Sbjct 869 CAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGCTGATTATAAC 810 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| ||| | || ||||| | ||| | || ||||| || Sbjct 809 ATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCCGTGGTGGTAT 760 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || || || || | ||||||||||| || ||| || Sbjct 305 ATGCAGATCTTTGTGAAAACCCTCACTGGAAAAACAATTACTCTTGAGGTTGAAAGTTCT 246 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||||||||||||| || || || ||||| ||||| Sbjct 245 GACACCATCGACAATGTGAAAGCAAAAATTCAAGACAAGGAGGGTATCCCACCAGATCAG 186 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | ||||| | ||| || | || || ||| Sbjct 185 CAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACTCTTGCAGACTATAAC 126 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | || |||||| | || | || ||||| || Sbjct 125 ATCCAGAAAGAATCCACTCTTCACTTGGTTCTTCGCCTCCGTGGTGGTAT 76 >seq68153 Length=714 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||||||||| || ||||| || || || ||| | || || || ||||| || || Sbjct 514 CATGCAGATATTCGTCAAAACCCTAACGGGAAAGACGATCACACTCGAAGTTGAGAGCTC 455 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| || | ||||| || || || ||||| ||||| || || || || || Sbjct 454 CGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCA 395 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||||| || | ||| ||||| || |||| || | ||| || | |||||||| Sbjct 394 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAA 335 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || || | ||| |||| |||||| || |||||||||| Sbjct 334 CATTCAGAAGGAATCAACTCTTCATCTGGTGTTGCGTCTGAGGGGTGGCAT 284 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || ||||||| ||| | ||||| || || ||||| || Sbjct 286 CATGCAGATTTTTGTCAAGACATTGACCGGGAAGACGATTACCCTGGAGGTGGAGAGTTC 227 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | ||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct 226 GGATACCATTGACAACGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCTGATCA 167 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || || || | || ||| | || || | |||||||| Sbjct 166 GCAGAGGCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGGCGTACTCTTGCTGATTACAA 107 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| |||||||| || | ||| | || | ||| | || ||||| Sbjct 106 CATTCAGAAGGAGTCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGG 59 >seq68514 Length=8688 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| ||||| || ||| | || ||||| ||||| || || Sbjct 8217 ATGCAGATCTTCGTCAAAACCCTGACGGGAAAGACGATCACTCTGGAAGTCGAGAGCTCT 8276 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||| |||||| || ||||| ||||| || ||||| ||||| Sbjct 8277 GACACCATTGACAACATCAAGGCAAAAATCCAGGACAAGGAAGGGATCCCACCTGATCAG 8336 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | || || || || |||| || | ||| || | ||||||||| Sbjct 8337 CAGCGCCTGATCTTTGCAGGGAAGCAGCTGGAGGATGGAAGGACGCTTGCGGATTACAAC 8396 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | ||| |||| |||||| || |||| || || Sbjct 8397 ATTCAGAAGGAGTCGACTCTTCATCTGGTGTTGCGTCTGAGGGGCGGTAT 8446 Score = 120 bits (132), Expect = 3e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || ||||| |||||||| ||| | ||||| || || || || Sbjct 589 CGGCATGCAGATCTTCGTCAAAACCCTGACCGGGAAGACGATTACCCTCGAGGTCGAGAG 648 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 |||||| |||| || | || || || || |||||||| || || || || ||||| Sbjct 649 CTCCGACACGATCGATAACGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCCGA 708 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||| | | || | |||||| || ||| | |||||| | |||| | ||||||| Sbjct 709 CCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCGAAGACGGCCGGACCTTGGCCGATTA 768 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || || ||||| ||| | || | | | || |||||||| Sbjct 769 CAACATCCAAAAAGAATCCACCTTGCATCTTGTCCTCAGGCTCCGTGGTGGCAT 822 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || ||| |||| || ||| |||||||||| || ||||| || Sbjct 1048 CATGCAAATTTTTGTCAAGACTTTGACTGGGAAGACTATTACTCTGGAGGTGGAGAGTTC 1107 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | ||||| ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 1108 TGATACAATTGATAATGTCAAGGCAAAGATTCAGGACAAGGAAGGGATTCCACCAGATCA 1167 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || || || | || ||| | ||| || | ||||| || Sbjct 1168 GCAGAGGCTCATCTTCGCTGGGAAGCAGCTAGAGGACGGCCGTACCCTTGCTGATTATAA 1227 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| ||||||||||| ||| | ||| | || | ||| | || ||||| Sbjct 1228 CATCCAAAAGGAGTCCACCCTCCATCTTGTCCTCCGTCTTCGTGGTGG 1275 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| ||||| || ||||||||| | || || || |||||||| ||| Sbjct 7989 ATGCAGATATTTGTGAAAACCCTCACCGGCAAGACAATCACCCTCGAAGTGGAGAGCTCC 8048 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || || || || || || || Sbjct 8049 GACACAATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCGCCGGACCAG 8108 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || ||| | |||||| | || | ||||||||||| Sbjct 8109 CAGCGTCTCATCTTTGCCGGGAAGCAACTCGAAGACGGCCGCACTTTGGCCGATTACAAC 8168 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 |||||||| || || || || ||| Sbjct 8169 ATTCAAAAAGAATCCACTTTGCAT 8192 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || ||||| || || || ||| | || ||||| || ||||| || Sbjct 820 CATGCAGATCTTCGTCAAAACCCTAACTGGGAAGACGATCACTCTCGAGGTGGAGAGTTC 879 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || ||||||| | ||||| || || |||||||| ||||| || ||||| ||||| Sbjct 880 AGATACGATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGATCA 939 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACA 27165 ||| | || || | ||||| ||||||||||||||| | || |||| | || || | Sbjct 940 ACAAAGATTGATCTTTGCCGGAAAACAATTGGAAGAC-GGCCGCACGTTGGCTGACTATA 998 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || || ||||| || | || | || | ||| | || || ||||| Sbjct 999 ACATCCAGAAAGAGTCAACTCTTCACCTTGTCCTCCGTCTCCGTGGAGGCAT 1050 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || ||||| || |||||||| | || ||||| |||||||| || Sbjct 365 ATGCAGATCTTCGTGAAAACCCTAACCGGCAAAACGATCACTCTCGAAGTGGAGAGCTCT 424 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || || || || || ||||| Sbjct 425 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGGATCCCTCCGGATCAG 484 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || ||| | ||||| | ||| | ||||||||||| Sbjct 485 CAGCGTCTGATCTTCGCCGGAAAGCAACTCGAAGATGGCCGCACCTTGGCCGATTACAAC 544 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 545 ATCCAGAAGGAGTCAAC 561 >seq13742 Length=406 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||| ||||||||||| | || ||||| || ||||| | | Sbjct 366 ATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTTC 307 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| ||||| || ||||| || || Sbjct 306 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACCGGACCAG 247 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||| || || | || ||| | ||| | | ||||||||| Sbjct 246 CAGCGGCTGATCTTCGCCGGAAAGCAGCTCGAGGACGGGCGCACCTTGGCGGATTACAAC 187 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || ||||||||||| Sbjct 186 ATCCAGAAGGAGTCGAC 170 >seq43778 Length=4696 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| ||||| || | || || ||||| || ||| || Sbjct 4187 ATGCAAATCTTTGTGAAGACTCTCACCGGAAAAACCATAACCCTTGAGGTTGAAAGCTCT 4128 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || || || ||||| ||||| || ||||| ||||| Sbjct 4127 GATACCATTGATAATGTCAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 4068 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || ||||| | || || | ||| | ||||||| ||| Sbjct 4067 CAGAGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGGCGCACCCTCGCCGATTATAAC 4008 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || |||||| | ||| | |||||||||| Sbjct 4007 ATCCAGAAGGAGTCGACCCTGCACTTGGTTCTTCGTCTTAGGGGTGGCAT 3958 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || ||||| || || || | || ||||| || || || || Sbjct 3048 CATGCAAATTTTTGTGAAGACTCTCACTGGAAAAACAATCACTCTGGAGGTAGAGAGTTC 2989 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| ||||||| | || || || || ||||| || || ||||| ||||| || || Sbjct 2988 GGACACGATTGATAATGTGAAGGCCAAGATCCAAGATAAGGAGGGCATTCCACCAGACCA 2929 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || ||||| || | ||||| | |||| || | |||||||| Sbjct 2928 GCAGAGGTTGATTTTTGCAGGCAAGCAGCTTGAAGATGGGAGGACCCTTGCAGATTACAA 2869 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| ||||| || || || |||||||| ||| | |||| || || || Sbjct 2868 CATTCAGAAGGAATCCACATTGCATTTGGTGTTGAGACTGCGTGGAGGAAT 2818 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || ||||| || |||||| | ||||| | ||||| || || Sbjct 3503 ATGCAAATCTTTGTTAAGACTCTTACTGGCAAGACCATTACCTTAGAAGTTGAGAGTTCG 3444 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| || ||||||||||| |||||||| || || || || Sbjct 3443 GATACTATTGACAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCTGACCAG 3384 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || | ||||| | |||| | |||| ||||| Sbjct 3383 CAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTCGCCGACTACAAT 3324 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 ||||| |||||||| || | || ||||| Sbjct 3323 ATTCAGAAGGAGTCCACTCTTCACTTGGT 3295 >seq68152 Length=1216 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || ||||||| ||| | ||||| || || ||||| || Sbjct 1162 CATGCAGATTTTTGTCAAGACATTGACCGGGAAGACGATTACCCTGGAGGTGGAGAGTTC 1103 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||| | ||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct 1102 GGATACCATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCTGATCA 1043 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | ||| || || || | || ||| | || || | |||||||| Sbjct 1042 GCAGAGGCTCATCTTCGCTGGGAAGCAGCTTGAGGACGGCCGTACTCTTGCTGATTACAA 983 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| |||||||| || | ||| | || | ||| | || ||||| Sbjct 982 CATTCAGAAGGAGTCCACTCTCCATCTCGTCCTCCGTCTCCGTGGTGG 935 >seq71848 Length=4061 Score = 102 bits (112), Expect = 7e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || ||||||||||| ||| | || || || || ||||| Sbjct 4032 CGGCATGCAGATCTTCGTCAAGACTCTGACCGGGAAGACGATCACCCTGGAGGTGGAGAG 3973 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 |||||| |||| || | || || || || || ||||| ||||| || || || || Sbjct 3972 CTCCGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCCCCCCGGA 3913 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||| | | || | ||||||||| || |||| ||| | ||| | ||||||| Sbjct 3912 CCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGATTA 3853 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || ||||| || || | || | || ||||| || |||| || || Sbjct 3852 TAACATCCAGAAGGAATCCACGCTCCACCTTGTGTTGCGCCTGAGGGGAGGAAT 3799 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||| ||| | || || || || ||||| ||| Sbjct 3800 ATGCAGATCTTCGTCAAGACGTTGACCGGGAAGACGATCACCCTGGAGGTGGAGAGCTCC 3741 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || |||||||| || || || || || || Sbjct 3740 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAG 3681 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||||||| || | || || | ||| | ||||||||||| Sbjct 3680 CAGAGGCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAAC 3621 Query 27168 ATTCAAAAGGAGTCGAC 27184 |||||||||||||| || Sbjct 3620 ATTCAAAAGGAGTCCAC 3604 >seq9721 Length=1405 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| |||||| ||||||||||| | || ||||| || ||||| ||| Sbjct 125 ATGCAGATCTTTGTGAAAACTTTGACCGGCAAGACCATCACTCTCGAGGTGGAGAGCTCC 184 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || || ||||| ||||| || |||| || || Sbjct 185 GACACGATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGGATTCCACTGGACCAC 244 Query 27108 CAGCGTTTAATATACGCCGGCAA 27130 ||||| | || | || ||| || Sbjct 245 CAGCGGCTGATCTTCGTCGGAAA 267 >seq41899 Length=578 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||| || | || |||| || ||||| ||| Sbjct 1 ATGCAGATCTTCGTCAAGACGTCGACCGGGAAAACCATCACTCAGGAGGTGGAGAGCTCC 60 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || ||||| ||||| || || || || || | || Sbjct 61 GACACGATCGACAACGTGAAGACGAAGATTCAGGACAAGGAGGGGATTCCGCCGGGCCAG 120 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTG-GAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | | || | |||| |||| ||||| || ||| | | ||| |||||||||| Sbjct 121 CAGAGGCTCATCTTCGCCAGCAAGCAATTTTGAGGACGGCTGGACTCGCGCCGATTACAA 180 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||||||||||||| || | || || || | ||| | | |||||| Sbjct 181 CATTCAAAAGGAGTCCACTCTCCACTTTGTCCTCCGTCTAAGTGGTGGC 229 >seq208088 Length=533 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||||||||| ||||| ||||| || || |||| || | ||||| || ||| Sbjct 119 ATGCAGATATTTGTGAAAACCCTGACTGGTAAAACTATCACCTTGGAAGTTGAGAGCTCC 60 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | |||||| |||||||| ||||| ||||| || ||||| || || Sbjct 59 GACACCATTGACAATGTCAAAGCCAAAATTCAGGACAAGGAAGGGATCCCACCAGACCA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433657468837784