Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq71848 147 2e-30 seq68470 123 2e-23 seq13742 122 8e-23 seq68514 113 4e-20 seq208088 111 1e-19 seq68153 111 1e-19 seq11653 107 2e-18 seq68152 104 2e-17 seq49145 96.9 3e-15 seq43799 96.9 3e-15 seq43778 96.9 3e-15 seq77946 95.1 1e-14 seq99008 91.5 1e-13 >seq71848 Length=4061 Score = 147 bits (162), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || ||||| || || |||||| |||||||| |||||||| |||| |||||||| Sbjct 3811 AGGCGCAACACAAGGTGGAGCGTGGATTCCTTCTGGATGTTATAATCGGCCAGGGTGCGG 3870 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 |||| || ||||||||||||||||| || || | ||| ||||||| ||| | | ||| Sbjct 3871 CCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATCCCTTCC 3930 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| || |||| ||| | | | |||||| ||||||||||| || Sbjct 3931 TTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATCGTGTCGGAGCTCTCCACCTCCAGGGT 3989 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || ||||| ||||| ||||| ||||||||| Sbjct 3990 GATCGTCTTCCCGGTCAGAGTCTTGACGAAGATCTGCATG 4029 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||| |||||||| || |||| | Sbjct 3574 CCACCACGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAATCGGCG 3633 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || |||||||||||||||||||| || || | ||| ||||||| ||| Sbjct 3634 AGAGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGAGGA 3693 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||||| ||| || |||| ||| | | | |||||| |||||| Sbjct 3694 ATCCCCTCTTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATCGTGTCGGAGCTCTCCAC 3752 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || || |||| |||||| ||||| |||||||| Sbjct 3753 CTCCAGGGTGATCGTCTTCCCGGTCAACGTCTTGACGAAGATCTGCAT 3800 >seq68470 Length=2690 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||||||||| | || ||||| || || ||||||||| ||||| || |||| Sbjct 434 GCCTCCGCGTAGACGAAGGACAAGATGGAGGGTTGACTCCTTCTGTATGTTGTAATCGGC 375 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| |||| |||||||| || || ||||| || || | ||| ||||||| ||| Sbjct 374 CAAGGTGCGGCCGTCCTCGAGCTGTTTTCCAGCGAAGATAAGCCTCTGCTGGTCCGGGGG 315 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||| | ||| | || || | ||| | | | |||||| ||| | Sbjct 314 AATTCCCTCCTTGT-CTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTCTCGA 256 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || | || || ||||| || ||||| || || ||||| ||||||||| Sbjct 255 CTTCGAGAGTAATAGTTTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 206 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || ||||| || || ||||||||| ||||| || |||| Sbjct 206 GCCTCCGCGGAGACGAAGGACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAATCGGC 147 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||| |||| ||||||||||| || || || || || | ||| ||||||| || Sbjct 146 CAAGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCCGGCGG 87 Query 41755 AACGCTCTCCTTGTC 41769 || | ||||||||| Sbjct 86 AATTCCCTCCTTGTC 72 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| ||||| || ||| |||||||||||||||||| || | Sbjct 1345 CCACCACGAAGGCGGAGCACAAGATGGAGGGTGGACTCCTTCTGAATGTTATAATCAGCT 1286 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || |||||||| || || || || || | ||| || || | ||| Sbjct 1285 AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGA 1226 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | | ||||||||| ||| | ||||| | ||| | | ||| || ||| ||| Sbjct 1225 ATCCCTTCCTTGTCC-TGAATCTTTGCCTTAACATTATCAATAGTATCTGAGCT---CTC 1170 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| || || || || || |||| ||||| || || |||||||| Sbjct 1169 CACCTCCAGAGTAATAGTCTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 1119 >seq13742 Length=406 Score = 122 bits (134), Expect = 8e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | || || || || || ||||||||| ||||| || || | Sbjct 139 GCCGCCGCGGAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 198 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||||| |||| ||||||||||| |||||||| ||||| ||||| ||||||| || Sbjct 199 CAAGGTGCGCCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGCCGCTGCTGGTCCGGTGG 258 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || | ||||||||| ||| || ||| || | || | |||||| |||| Sbjct 259 AATCCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCG--ATCGTGTCGAAGCTCTCC 316 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || || || || || |||| || || || || |||||||| Sbjct 317 ACCTCGAGAGTGATGGTCTTGCCGGTCAAAGTTTTCACAAAGATCTGCAT 366 >seq68514 Length=8688 Score = 113 bits (124), Expect = 4e-20 Identities = 168/232 (72%), Gaps = 10/232 (4%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| | ||||| ||||||||||| || || ||||||||||||||| || || | Sbjct 8443 CCGCCCCTCAGACGCAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAATCCGCA 8384 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || | | || || |||||||| || || || ||||||||||| || || | ||| Sbjct 8383 AGCGTCCTTCCATCCTCCAGCTGCTTCCCTGCAAAGATCAGGCGCTGCTGATCAGGTGGG 8324 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 | | || ||||||||| || ||||||| | | | | | | ||||| ||| || Sbjct 8323 ATCCCT-TCCTTGTCC-TGGATTTTTGCCTTGATGTTGTCAATGGTGTCAGAGCT---CT 8269 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| || ||||| || |||||||| || || ||||| |||||||| Sbjct 8268 CGACTTCCAGAGTGATCGTCTTTCCCGTCAGGGTTTTGACGAAGATCTGCAT 8217 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| |||||| ||||||||||| || | Sbjct 8671 CCACCACGAAGACGGAGGACAAGATGGAGGGTGGACTCCTTTTGAATGTTATAATCAGCT 8612 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | || || | || || |||||||| || || || || || | ||| || || | ||| Sbjct 8611 AAAGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGATCAGGTGGA 8552 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||| ||| ||| | || || | || | | | || || |||||| Sbjct 8551 ATCCCTTCCTTATCC-TGAATCTTAGCCTTGACATTGTCAATGGTATCAGAACTCTCCAC 8493 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || ||||| || || || ||||| |||||||||||||| Sbjct 8492 CTCCAGGGTAATTGTTTTCCCAGTAAGAGTCTTGACGAAAATCTGCAT 8445 >seq208088 Length=533 Score = 111 bits (122), Expect = 1e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | |||||| | ||||| || || ||| ||||||||||||||||||||||| Sbjct 121 CCACCTCTTAGACGGAGGACCAGGTGGAGTGTGGACTCCTTCTGAATGTTATAGTCGGCA 180 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 |||||||| | || || || || ||||| || || || || | || ||||| | ||| Sbjct 181 AGGGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGG 240 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | || ||||||||| ||| |||| |||| || | | | |||||| |||| Sbjct 241 ATCCCT-TCCTTGTCC-TGAATTTTGGCTTTGACATTGTCAATGGTGTCGGAGCTTTCCA 298 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || |||||||| || |||||||| Sbjct 299 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTTACAAAGATCTGCAT 347 >seq68153 Length=714 Score = 111 bits (122), Expect = 1e-19 Identities = 168/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || ||| ||||||||||||||| || || | Sbjct 59 CCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCA 118 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754 || || ||| |||| || |||||||| || ||||| || || | ||| || || | ||| Sbjct 119 AGAGTACGCCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGGG 178 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA---CTC 41811 | | || ||||||||| ||| | || || | ||| | || | || | ||| ||| Sbjct 179 ATCCCT-TCCTTGTCC-TGAATCTTGGCCTTGACGTTGTCA-ATGGTATC-CGAACTCTC 234 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| || ||||| || || |||| ||||| || |||||||||||| Sbjct 235 CACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCATG 286 Score = 105 bits (116), Expect = 6e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 ||||| ||||||||||| || || |||||||||||||| || || | || || | Sbjct 296 AGACGCAACACCAGATGAAGAGTTGATTCCTTCTGAATGTTGTAATCCGCAAGCGTCCTT 355 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||| ||||| |||| ||||| ||||||| |||| | ||| Sbjct 356 CCATCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCCGGCGGAATCCCTTCC 415 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| || | || || | ||| | | | |||||| ||| || || | || Sbjct 416 TTGTCC-TGGATCTTGGCCTTGACGTTGTCGATCGTGTCGGAGCTCTCAACTTCGAGTGT 474 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || ||||| || || || ||||| ||||||||| Sbjct 475 GATCGTCTTTCCCGTTAGGGTTTTGACGAATATCTGCATG 514 >seq11653 Length=224 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | || || || || || ||||||||| ||||| || || | Sbjct 187 GCCGCCGCGGAGACGAAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 128 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | |||||||||||| || |||||||| |||||||| ||||| ||||| ||||||| || Sbjct 127 CAAGGTGCGCTCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGG 68 Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778 || | || |||||| ||| || Sbjct 67 AATCCCTTCGTTGTCCTGGATCTT 44 >seq68152 Length=1216 Score = 104 bits (114), Expect = 2e-17 Identities = 169/236 (72%), Gaps = 8/236 (3%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | || ||||| || ||| ||||||||||||||| || || Sbjct 931 ACCACCACCACGGAGACGGAGGACGAGATGGAGAGTGGACTCCTTCTGAATGTTGTAATC 990 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CG 41750 | || || || |||| || |||||||| || ||||| || || | ||| || || | Sbjct 991 AGCAAGAGTACGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGG 1050 Query 41751 CGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGA-- 41808 |||| | || ||||||||| ||| | || || | || | || | || | ||| Sbjct 1051 TGGGATCCCT-TCCTTGTCC-TGAATCTTGGCCTTGACATTGTCA-ATGGTATC-CGAAC 1106 Query 41809 -CTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||||||| || ||||| || || |||| ||||| || |||||||||||| Sbjct 1107 TCTCCACCTCCAGGGTAATCGTCTTCCCGGTCAATGTCTTGACAAAAATCTGCATG 1162 >seq49145 Length=1022 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||| | ||||| | || || || || || ||||||||| ||||| || || | Sbjct 873 GCCGCCGTGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCCGC 814 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||||||| |||| ||||||||||| || ||||| ||||| ||||| ||||| | || Sbjct 813 CAAGGTGCGCCCGTCCTCGAGCTGCTTTCCAGCGAAGATCAGCCGCTGCTGGTCTGGTGG 754 Query 41755 AACGCTCTCCTTGTCC 41770 || | ||||||||| Sbjct 753 AATCCCTTCCTTGTCC 738 >seq43799 Length=2218 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| ||| || || ||||||||| ||||| ||||| | Sbjct 307 CCACCACGGAGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCA 366 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || || |||||||| || || | | |||||| || | || Sbjct 367 AGAGTACGACCATCTTCAAGTTGTTTGCCGGCAAAGATTAACCTCTGTTGATCAGGTGGG 426 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTC---GCTCGACT 41810 | || |||||||||| ||| || ||| || | ||| ||||| ||| | Sbjct 427 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATC--GTGTCAGAGCTT---T 481 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | ||||||| ||||| || ||||| ||||| || || || |||||||||||| Sbjct 482 CAACCTCCAAAGTTATAGTCTTACCAGTCAGGGTTTTCACAAAAATCTGCATG 534 >seq43778 Length=4696 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| ||||| ||| |||||||||||||| || || | ||||| | | | || Sbjct 2836 AACACCAAATGCAATGTGGATTCCTTCTGAATGTTGTAATCTGCAAGGGTCCTCCCATCT 2895 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || ||||||||||| || || |||| | ||| ||||| | |||| || |||||| || Sbjct 2896 TCAAGCTGCTTGCCTGCAAAAATCAACCTCTGCTGGTCTGGTGGAATGCCCTCCTTATCT 2955 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGA---CTCCACCTCCACCGTTAT 41826 ||| || ||||| | | | | ||||| ||| ||| ||||||| || || Sbjct 2956 TGGATCTTGGCCTTCACATTATCA-ATCGTGTC---CGAACTCTCTACCTCCAGAGTGAT 3011 Query 41827 CGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| || || || ||||| || ||||| |||||| Sbjct 3012 TGTTTTTCCAGTGAGAGTCTTCACAAAAATTTGCATG 3048 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||||| || || || ||||||||| ||||| ||||| | Sbjct 3505 CCACCACGGAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCT 3564 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || || ||||| || || |||| | ||| || || | || Sbjct 3565 AGAGTACGGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAATCTCTGCTGATCGGGAGGG 3624 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || |||||||||| ||| | || || | || | | | ||||| ||| || Sbjct 3625 ATGCCCTCCTTGTCC-TGAATCTTAGCCTTGACATTGTCGATTGTGTCAGAGCTT---TC 3680 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||||| |||||||| ||||| || || || ||||||||||| Sbjct 3681 AACCTCCAAAGTTATAGTTTTACCAGTCAGGGTTTTCACAAAAATCTGCAT 3731 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||| || || ||||| | | || ||| | || || |||||||| ||||| || Sbjct 2628 CTCCTTCTGGATATTGTAGTCAGCCAAAGTACGCCCATCCTCCAGCTGCTTCCCGGCAAA 2687 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACG 41789 |||| | ||| || || | |||| | ||||||||| |||||| ||||| | Sbjct 2688 AATCAACCTCTGCTGATCTGGAGGAATCCCTTCCTTGTCCTGGATTTTAGCCTTCACATT 2747 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| ||| ||||||| || || ||||| || |||| ||||| | Sbjct 2748 ATCA-ATGGTGTCTGAACTCTCAACCTCCAGGGTGATGGTTTTTCCTGTCAATGTCTTCA 2806 Query 41850 CGAAAATCTGCAT 41862 ||||||||||||| Sbjct 2807 CGAAAATCTGCAT 2819 >seq77946 Length=1578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | || || || || || |||||| || ||||| ||||||| Sbjct 1428 CGCCACCACGGAGACGGAGGACGAGGTGGAGTGTTGACTCCTTTTGGATGTTGTAGTCGG 1487 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||| | |||| ||||||||||| |||||||| || || ||||| ||||||| | Sbjct 1488 CTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 1547 Query 41754 GAACGCTCTCCTTGTCCATGATTTT 41778 ||| | |||||| ||| ||| || Sbjct 1548 GAATCCCCTCCTTATCCTGGATCTT 1572 >seq99008 Length=1232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| || ||||| ||||||| ||||| | |||| ||||||||||| |||||||| Sbjct 15 CTCCTTTTGGATGTTGTAGTCGGCTAGGGTTCTGCCGTCCTCGAGCTGCTTTCCGGCGAA 74 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 || || ||||| ||||||| |||| | |||||||||| ||| || Sbjct 75 GATGAGACGCTGCTGGTCCGGTGGAATCCCCTCCTTGTCCTGGATCTT 122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460925825545600