Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq481 113 5e-20 >seq481 Length=6868915 Score = 113 bits (124), Expect = 5e-20 Identities = 256/376 (68%), Gaps = 13/376 (3%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || ||||| ||||| |||| ||||| |||| ||| | |||||||| || || Sbjct 949349 AGGCAGGCGAAATCGCAGTGTAAGCCTTCATCTCGAGAGATCAACTCGTTGGAGAAGGTC 949290 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAA-AA 16317 || || ||||| ||||| ||||| | |||||| |||| |||| | | ||| | || Sbjct 949289 AATCCCGGCATGAGCCCTCGCTTCTTCAGCCAGAAGATCG-AGCAGAAGCTACCGGAGAA 949231 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGT---AGCATCTTT 16374 ||| ||||| || || | || |||||||| | || ||| ||| | || || ||| | Sbjct 949230 GAAGATACCTTCGACGCAGGCGAAAGCGATGATTCTTTCGGCGAAGGTCTGAG-ATCCGT 949172 Query 16375 ATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTAT 16434 ||| |||| ||| |||| | ||||| | | ||| || ||||| || Sbjct 949171 ----CGA-TCCACTTCATGGCCCACTGTGCTTTCTTCGCGACGCAAGGGATGGTTTCGAT 949117 Query 16435 GGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACT 16494 || || | | ||| | || | | || | || |||||||| | || | ||| Sbjct 949116 TGCTCGGAAGAGATGGTCTCTCTCTTTGTTGTCCTTGATGTACGTATCGAGGAGGAGACT 949057 Query 16495 GTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG-AAGCATCGAGCCT 16553 |||||| || ||||| |||||||| || || ||||| ||||||||| ||||| || |||| Sbjct 949056 GTACATCTCCGAGTGGATGTTCTCGATCGCGATCTGGAATCCATAGAAAGCA-CGCGCCT 948998 Query 16554 CCGCTATTTGTACTTC 16569 ||| | |||||| || Sbjct 948997 CCGAGACTTGTACATC 948982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511409893160600