Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq320 100 3e-16 >seq320 Length=3991519 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483 |||||| ||||| || | |||||||| || || || |||||| | | || | | || Sbjct 317071 AGTTCCTGCATTGAAGAGAGTAGGAGATGCATGAGTGAACCATCTCTGCGACATCAAATG 317012 Query 54484 GTACGTCTCGATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTA 54542 ||| |||| ||| || || || ||||| | ||| || || || || || || | ||||| Sbjct 317011 GTAAGTCTTGATTGCAGAATCAATATCGTCCTTG-TGGATGCCAACAGCAACCCTCATTA 316953 Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602 |||||||||||| |||||||| | ||| | | ||| | | ||| ||| | || | Sbjct 316952 GCATGTGCTGAGGCCTTTCAACAACTTTGCCATGGACTTTTAAGAGGTACGATCTCTCAA 316893 Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 |||||| || ||||| || | ||| ||| || || ||||| || || Sbjct 316892 GAGTTTTGAATCCAAAGTAATCATATTCAAAATCACGGTCGTAGATGAT 316844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593716367828400