Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq393 89.7 4e-13 seq664 86.0 5e-12 >seq393 Length=11819561 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || ||||||||| | || ||||||||| || || || ||||| || || ||||||||| Sbjct 4935936 GACAAAGAAGGTATACCACCAGATCAACAGAGGCTGATATTTGCCGGTAAGCAACTGGAA 4935877 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||| | ||| | || |||||||| || ||||| || |||||||||||| | || || Sbjct 4935876 GATGGCCGAACCCTAGCGGATTACAACATCCAGAAAGAGTCTACTCTTCACCTCGTCTT 4935818 >seq664 Length=12074320 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | ||||| ||||| ||||| || || || || ||| | | Sbjct 3114371 ATGCAAATCTTCGTTAAAACCTTGACTGGCAAGACTATCACTTTGGAGGTCGAAAGCTCC 3114312 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || ||||| || || ||||| ||||| | || || || Sbjct 3114311 GACACCATCGACAATGTTAAGGCGAAGATCCAGGATAAGGAAGGCATCCCTCCGGACCAG 3114252 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| | ||||| || ||||| || || || ||| || |||||||||||||| Sbjct 3114251 CAAAGGTTGATCTTCGCAGGCAAGCAGCTTGAGGATGGTCGCACCTTGGCCGATTACAAT 3114192 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || |||||||| ||||| |||||| |||| || || | || ||||| Sbjct 3114191 ATCCAGAAGGAGTCTACCCTTCACTTGGTCTTGCGTCTCCGTGGAGG 3114145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428332319656775