Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq320 100 3e-16 >seq320 Length=3991519 Score = 100 bits (110), Expect = 3e-16 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 38400 TTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTC 38459 ||||||| ||||||||| || || || | |||||||||||||| |||||||| | | Sbjct 317083 TTGAGGCCTTGGAGTTCCTGCATTGAAGAGAGTAGGAGATGCATGAGTGAACCATCTCTG 317024 Query 38460 CGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGA 38519 ||||| ||| || || | ||| || ||| ||||| | ||| || || | || Sbjct 317023 CGACATCAAATGGTAAGTCTTGATTGCAGAATCAATATCGTCCTTGTGGATGCCAACAGC 316964 Query 38520 TACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTAT--TCTGTTTAAGTAGA 38577 |||||||||||||| || || || ||||| | | ||| || || |||||| || Sbjct 316963 AACCCTCATTAGCATGTGCTGAGGCCTTTCAACAACTTTGCCATGGACT-TTTAAG-AGG 316906 Query 38578 TACGATTTTTCTAATGTTTTTATTCCAAAATAACTATATGAATAATCTCTATCGTA 38633 |||||| | || | ||||| | |||||| ||| |||| | |||| | ||||| Sbjct 316905 TACGATCTCTCAAGAGTTTTGAATCCAAAGTAATCATATTCAAAATCACGGTCGTA 316850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468520671125200