Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq117 187 2e-42 >seq117 Length=8551 Score = 187 bits (206), Expect = 2e-42 Identities = 208/273 (76%), Gaps = 10/273 (4%) Strand=Plus/Plus Query 80312 GTCGATGCAATTCTCACAGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGAC 80371 || || ||||| |||| ||||||||||||| || || |||||||||||||| |||||| Sbjct 7711 GTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGAC 7770 Query 80372 GGCTCGGGCATCGCCTTCGACGTCGAGATGTG--GGAGCAATGCCTGCGGGTCCTCAAGC 80429 ||| | || || || | || ||| | | ||| ||| ||||| ||||||| Sbjct 7771 GGC-----CTTCCCCCGTCAC-TGGA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAGC 7822 Query 80430 CCGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTGACCGTGGCCA 80489 ||||||| ||| | ||| ||||| ||| |||||||||||||||| || |||| |||| Sbjct 7823 CCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGCCA 7882 Query 80490 TCGAGGACGCCGGGTTTGAGATCCGCGACTCGATCGCCTGGCTGTACGGCAGCGGGTTCC 80549 |||| ||||| || || || || |||||||| |||||||||| ||||| || |||| Sbjct 7883 TCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATTCC 7942 Query 80550 CGAAGTCGCTCGACGTGGCGAAGGCGATCGACA 80582 ||||||| | ||||||| |||||| ||||||| Sbjct 7943 CGAAGTCCTTGGACGTGGGGAAGGCAATCGACA 7975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354640152839130