Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq497 563 2e-156 seq456 563 2e-156 seq219 563 2e-156 >seq497 Length=57642 Score = 563 bits (624), Expect = 2e-156 Identities = 725/995 (73%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || || || ||||| | || |||||||| || | Sbjct 15637 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 15578 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| | ||||| | || || || || || || Sbjct 15577 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCT 15518 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || | | || ||||||||| Sbjct 15517 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAAT 15458 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 |||||||| || || | |||| | || || || || |||| ||||| |||||| Sbjct 15457 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 15398 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| ||| |||||||||| ||||| ||| |||| |||| Sbjct 15397 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 15338 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||| ||| | || ||||| || ||| | |||||||||| || | | Sbjct 15337 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 15278 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| |||| Sbjct 15277 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 15218 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | |||||| |||| ||||| |||||| ||||||||||||||| || || Sbjct 15217 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 15159 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 |||||||||||| ||||||||| | |||||||| || || ||||| || || |||||||| Sbjct 15158 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCC 15099 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 ||| |||||||| ||||| ||||| |||||||| || || || || ||||||||| || Sbjct 15098 GTTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 15039 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 15038 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 14979 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || || || ||||| ||||| ||||| || ||||| Sbjct 14978 TTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 14919 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| | || Sbjct 14918 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 14859 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 ||| || || || || || ||| |||| | | || || | |||||||||||||| Sbjct 14858 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 14799 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 ||| |||||||| || || ||||| |||||||||||| ||||| ||| | || | Sbjct 14798 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAA-GGACGCGTTATTAATA 14740 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || | |||||||| || | ||||||||||| || || |||| Sbjct 14739 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 14680 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGGCTGAG 20282 |||| |||||||| || || ||||| | | |||| Sbjct 14679 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 14645 >seq456 Length=23154 Score = 563 bits (624), Expect = 2e-156 Identities = 725/995 (73%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || || || ||||| | || |||||||| || | Sbjct 16610 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 16551 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| | ||||| | || || || || || || Sbjct 16550 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCT 16491 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || | | || ||||||||| Sbjct 16490 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAAT 16431 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 |||||||| || || | |||| | || || || || |||| ||||| |||||| Sbjct 16430 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 16371 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| ||| |||||||||| ||||| ||| |||| |||| Sbjct 16370 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 16311 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||| ||| | || ||||| || ||| | |||||||||| || | | Sbjct 16310 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 16251 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| |||| Sbjct 16250 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 16191 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | |||||| |||| ||||| |||||| ||||||||||||||| || || Sbjct 16190 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 16132 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 |||||||||||| ||||||||| | |||||||| || || ||||| || || |||||||| Sbjct 16131 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCC 16072 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 ||| |||||||| ||||| ||||| |||||||| || || || || ||||||||| || Sbjct 16071 GTTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 16012 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 16011 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 15952 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || || || ||||| ||||| ||||| || ||||| Sbjct 15951 TTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 15892 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| | || Sbjct 15891 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 15832 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 ||| || || || || || ||| |||| | | || || | |||||||||||||| Sbjct 15831 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 15772 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 ||| |||||||| || || ||||| |||||||||||| ||||| ||| | || | Sbjct 15771 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAA-GGACGCGTTATTAATA 15713 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || | |||||||| || | ||||||||||| || || |||| Sbjct 15712 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 15653 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGGCTGAG 20282 |||| |||||||| || || ||||| | | |||| Sbjct 15652 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 15618 >seq219 Length=26726 Score = 563 bits (624), Expect = 2e-156 Identities = 725/995 (73%), Gaps = 4/995 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || || || ||||| | || |||||||| || | Sbjct 17407 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 17348 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| | ||||| | || || || || || || Sbjct 17347 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCT 17288 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || | | || ||||||||| Sbjct 17287 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAAT 17228 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 |||||||| || || | |||| | || || || || |||| ||||| |||||| Sbjct 17227 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 17168 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| ||| |||||||||| ||||| ||| |||| |||| Sbjct 17167 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 17108 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||| ||| | || ||||| || ||| | |||||||||| || | | Sbjct 17107 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 17048 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| |||| Sbjct 17047 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 16988 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | |||||| |||| ||||| |||||| ||||||||||||||| || || Sbjct 16987 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 16929 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 |||||||||||| ||||||||| | |||||||| || || ||||| || || |||||||| Sbjct 16928 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCC 16869 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 ||| |||||||| ||||| ||||| |||||||| || || || || ||||||||| || Sbjct 16868 GTTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGG 16809 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 16808 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 16749 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || || || ||||| ||||| ||||| || ||||| Sbjct 16748 TTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGG 16689 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| | || Sbjct 16688 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 16629 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 ||| || || || || || ||| |||| | | || || | |||||||||||||| Sbjct 16628 GGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAA 16569 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 ||| |||||||| || || ||||| |||||||||||| ||||| ||| | || | Sbjct 16568 CCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAA-GGACGCGTTATTAATA 16510 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || | |||||||| || | ||||||||||| || || |||| Sbjct 16509 CTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 16450 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGGCTGAG 20282 |||| |||||||| || || ||||| | | |||| Sbjct 16449 CTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 16415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144440390752980