Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq385 114 3e-20 >seq385 Length=11279646 Score = 114 bits (126), Expect = 3e-20 Identities = 118/152 (78%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 111671 AATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACGGGATGCTTT 111729 |||||||||||| ||||| || | | | ||| ||||||||||| | || ||||| Sbjct 2131420 AATGGCACTTCCTCCATGCCA-CATGTTTGCGCAGTTTTATGTTGCAAATGGAGAGCTTT 2131478 Query 111730 CATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAA 111789 |||| |||||||||||||| || || ||||| ||||||||||| |||||||| ||||| Sbjct 2131479 CATGTCAAATGTATCAGCGCTCAGCCGATATGGGTCTTGGTGTACCGTTTAACATTGCCT 2131538 Query 111790 GTTACGCACTACTTACTTGCTTAATCGCTCAT 111821 ||| | || ||||| ||| | |||||||| Sbjct 2131539 CATACTCCCTTCTTACATGCATCCTCGCTCAT 2131570 Score = 102 bits (112), Expect = 2e-16 Identities = 157/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 |||||||||||| ||| ||||| || | |||||| | || | |||||| |||| Sbjct 380379 ATGAAGGACGATAGCATTGAGGGAATATATGACACTTTGAAAGAGTGTGCTGTTATAAGT 380438 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACAT 363740 || ||| || || |||||||| || | ||||| | || || || | | |||||||| Sbjct 380439 AAATCTGCCGGTGGTATTGGTGTTTCAGTTCACAACATCCGCGCAACTGGA-AGTTACAT 380497 Query 363741 TCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 ||| |||||| ||| || ||||| | ||||| ||||| || ||||| || |||| Sbjct 380498 TCGTGGCACAAATGGAGTATCTAATGGTATTGTTCCAATGCTGCGGGTGTTCAACGATAC 380557 Query 363801 TGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGG 363840 ||| | || || || || || ||||| ||| | |||||| Sbjct 380558 TGCTCGCTATGTTGATCAAGGAGGAGGCAAGAG-AAAGGG 380596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303341827051310