Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq481 197 3e-45 >seq481 Length=6868915 Score = 197 bits (218), Expect = 3e-45 Identities = 416/609 (68%), Gaps = 16/609 (3%) Strand=Plus/Plus Query 42408 TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG 42467 ||| ||||| || | || || |||||||||||||| ||||| || ||| ||||| || Sbjct 948904 TTCATCAAACACGTCCTCGCTTTCTTCGCCGCCTCAGACGGAATCGTCCTGGAGAATCTT 948963 Query 42468 GCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCA 42526 || ||||||||||| || || || || |||||||| ||| ||||| || ||||| Sbjct 948964 GCTTCCAGGTTCATGTCCGATGTACAAGTCTCGGAGGCGCG-TGCTTTCTATGGATTCCA 949022 Query 42527 GATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCT 42586 ||| || || |||||| | ||||| ||| ||||| || ||| | ||||||||| Sbjct 949023 GATCGCGATCGAGAACATCCACTCGGAGATGTACAGTCTCCTCCTCGATACGTACATCAA 949082 Query 42587 GGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 ||| | ||| | || || ||| || || || || || || ||| || ||| Sbjct 949083 GGACAACAAAGAGAGAGACCATCTCTTCCGAGCAATCGAAACCATCCCTTGCGTCGCGAA 949142 Query 42647 GAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCA-ACGTTCGGCGAGAGG 42704 ||| || | ||||| | || |||||||| | || | || || |||| ||| || Sbjct 949143 GAAAGCACAGTGGGCCATGAAGTGGATCGA-----CGGATCTCAGACCTTCGCCGAAAGA 949197 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 | | || || || |||||| || ||||||||||| || |||| ||| |||||| Sbjct 949198 ATCATCGCTTTCGCCTGCGTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGCTCGATCTTC 949257 Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||| ||| || ||| || ||||| ||| | |||||||| ||||| | ||| | Sbjct 949258 TGGCTGAAGAAGCGAGGGCTC-ATGCCGGGATTGACCTTCTCCAACGAGTTGATCTCTCG 949316 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 || || || | || | || || |||||||| || | | || | ||| ||| || Sbjct 949317 AGATGAAGGCTTACACTGCGATTTCGCCTGCCTTCTCTACACG---CTCCTGAGGACGAA 949373 Query 42884 GCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTT 42943 || |||| ||||||| || | | ||| || || ||||| |||||||||| |||||| Sbjct 949374 GCTCTCGGAGGAGCGAGTGAAGTCGATCGTCTGCGACGCCGTCGAGATCGAGAGGGAGTT 949433 Query 42944 CCTCACGCAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGT 43002 || | |||| ||||| | | || || ||||||| ||||| ||| | ||| Sbjct 949434 TGTCTGCGACGCGCT-TCCGTGCGCGTTAGTGGGGATGAACCGGGACCTGATGAGTCAGT 949492 Query 43003 ACATCCAGT 43011 | ||| ||| Sbjct 949493 ATATCGAGT 949501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944330878010800