Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq385 116 3e-21 >seq385 Length=11279646 Score = 116 bits (128), Expect = 3e-21 Identities = 193/275 (70%), Gaps = 8/275 (3%) Strand=Plus/Minus Query 20246 ACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAA 20305 |||||||| || || | || | ||||| || |||||||||||| || || || | | Sbjct 2131572 ACATGAGCGAGGATGCATGTAAGAAGGGAGTATGAGGCAATGTTAAACGGTACACCAAGA 2131513 Query 20306 CCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAAT 20365 ||||| || | || | |||||||| ||||| |||||||| || | || |||||||| Sbjct 2131512 CCCATATCGGCTGAGCGCTGATACATTTGACATGAAAGCTCTCCATTTGCAACATAAAAC 2131453 Query 20366 TGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCA 20425 || |||| ||| || || ||||| ||||| ||| | ||| | || ||||| || Sbjct 2131452 TGCGCAAACATGTGGCATGGAGGAAGTGCCATTAACTTAAGGTCAGAAGGATTCCAAGCC 2131393 Query 20426 CACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAATCCACAATGTACGA 20481 |||| || || | || ||| | ||||| || || || | ||| || || || | Sbjct 2131392 GACATTATTATCCGTCGATCATCAGGATTGTTCTTGATCTTGTTAAT-TAC-ATCTA--A 2131337 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCAT 20516 | ||| ||||| || ||||| ||||| ||||||| Sbjct 2131336 GAGTTGATCAAATCCTTGGCCAGTATAATCAGCAT 2131302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441368910402200