Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_014458.1 Length=59598 Score E Sequences producing significant alignments: (Bits) Value seq334 145 3e-30 >seq334 Length=7771 Score = 145 bits (160), Expect = 3e-30 Identities = 297/430 (69%), Gaps = 30/430 (7%) Strand=Plus/Minus Query 2017 TGTTCGGCGCACGCGAGAAAGGGTTCGGCCGTGGTTTCGCCAAGGTCGACGTCCTGATCT 2076 |||| || || |||||| || ||||| ||||| ||||| ||||| ||||| ||||||| Sbjct 7128 TGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTCGCGAAGGTGGACGTGCTGATCT 7069 Query 2077 TCGACGAGGCGCAGATTCTCAGCGAAAACGCGATGGACGACATGATCCCGGCGACCAACG 2136 |||| ||||||||||| |||| || || || ||||| |||||| | ||||| || |||| Sbjct 7068 TCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAGGACATGGTTCCGGCAACGAACG 7009 Query 2137 CATCGCCTAACGGTC---TGATCCTGTTCGCGGGCACGCCGCCGAAGCCCACCGATCCCG 2193 | | ||||| |||| || || || || ||||| || ||| ||||| || || | Sbjct 7008 CGGCACCTAATGGTCTGGTGTTCATGATC---GGCACTCCCCCGCGCCCCACGGACCCGG 6952 Query 2194 GCGAGGTATTCACCAACCTGCGCATGGATGCG---CTCAACGGCGA--ATCTGACGACGT 2248 ||||||| ||| | | ||||| ||| ||| || ||||| | | | ||||| Sbjct 6951 GCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCACTGTCGGGCGAGGACCCG--GACGT 6897 Query 2249 TGCTTACGTCGAGATATCGGCCGACGAAAACGACGACCCAGACGAAGAGTCGACCTGGCG 2308 ||||| ||| | |||||||| | ||| |||| ||||| || | ||||| Sbjct 6896 GATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACGACCGTGCGGCGTGGCG 6837 Query 2309 CAAGATGAATCCGAGCTACCCGCATCGGACGTCCGCGCGAGCGATTCGCCGTATGCGTAA 2368 ||| ||| ||| | |||||| |||||| | | | ||||| || ||||| | Sbjct 6836 GAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCGATCTTGCGCATGCG-GA 6778 Query 2369 AGC--CT------TGTCCTGGGACAGTTTCAGGCGCGAGGCAATGGGCATCTGGGACAAG 2420 ||| || |||| | | | ||||| | || |||| |||||||||||||| || Sbjct 6777 AGCTGCTGGGGTCTGTC--GAGTC-GTTTC-GCCGTGAGGGTCTGGGCATCTGGGACGAG 6722 Query 2421 -ATCAGCGTG 2429 | ||||||| Sbjct 6721 AAGCAGCGTG 6712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190590404387600