Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq497 558 4e-154 seq456 558 4e-154 seq219 558 4e-154 >seq497 Length=57642 Score = 558 bits (618), Expect = 4e-154 Identities = 723/999 (72%), Gaps = 0/999 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | || | ||||| |||| ||||| ||||| || Sbjct 15637 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 15578 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | ||| ||| | || || |||||||| || Sbjct 15577 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCT 15518 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | |||||||| | || |||| | ||||||||||| Sbjct 15517 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAAT 15458 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 15457 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 15398 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| ||| |||| || ||||||||||| | | | | Sbjct 15397 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 15338 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||||| || | || | || || |||||| | |||||||| | | | | Sbjct 15337 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 15278 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 15277 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 15218 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || ||| ||||||||||||||||||||||| Sbjct 15217 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 15158 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||| ||| | |||||||| || |||||||||||||| |||||||| Sbjct 15157 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCCG 15098 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||||||| Sbjct 15097 TTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 15038 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 || | ||||| ||| | | ||||| || || || || | |||||| || | ||| Sbjct 15037 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 14978 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 |||| |||||||||||||||||||| || || ||||| || || || || || || || Sbjct 14977 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 14918 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 |||| |||||||| ||||| ||||||||||| || | | | || |||||| |||| Sbjct 14917 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 14858 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | || || ||| || | ||||| || || | ||||| |||| ||||| |||||| Sbjct 14857 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 14798 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 | || || || || || ||||||||||| || ||| | | || | ||| ||| Sbjct 14797 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACT 14738 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 14737 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 14678 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||||||||| |||||| |||| ||| |||| || || Sbjct 14677 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 14639 >seq456 Length=23154 Score = 558 bits (618), Expect = 4e-154 Identities = 723/999 (72%), Gaps = 0/999 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | || | ||||| |||| ||||| ||||| || Sbjct 16610 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 16551 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | ||| ||| | || || |||||||| || Sbjct 16550 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCT 16491 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | |||||||| | || |||| | ||||||||||| Sbjct 16490 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAAT 16431 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 16430 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 16371 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| ||| |||| || ||||||||||| | | | | Sbjct 16370 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 16311 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||||| || | || | || || |||||| | |||||||| | | | | Sbjct 16310 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 16251 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 16250 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 16191 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || ||| ||||||||||||||||||||||| Sbjct 16190 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 16131 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||| ||| | |||||||| || |||||||||||||| |||||||| Sbjct 16130 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCCG 16071 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||||||| Sbjct 16070 TTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 16011 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 || | ||||| ||| | | ||||| || || || || | |||||| || | ||| Sbjct 16010 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 15951 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 |||| |||||||||||||||||||| || || ||||| || || || || || || || Sbjct 15950 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 15891 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 |||| |||||||| ||||| ||||||||||| || | | | || |||||| |||| Sbjct 15890 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 15831 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | || || ||| || | ||||| || || | ||||| |||| ||||| |||||| Sbjct 15830 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 15771 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 | || || || || || ||||||||||| || ||| | | || | ||| ||| Sbjct 15770 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACT 15711 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 15710 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 15651 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||||||||| |||||| |||| ||| |||| || || Sbjct 15650 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 15612 >seq219 Length=26726 Score = 558 bits (618), Expect = 4e-154 Identities = 723/999 (72%), Gaps = 0/999 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | || | ||||| |||| ||||| ||||| || Sbjct 17407 TTCTGTAACTGGATAACCAGCACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTG 17348 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCA 168610 |||||||| ||||| || ||| | | ||| ||| | || || |||||||| || Sbjct 17347 ATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCT 17288 Query 168611 CCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAAC 168670 || || ||||| || || || | |||||||| | || |||| | ||||||||||| Sbjct 17287 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAAT 17228 Query 168671 ATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATT 168730 || || |||||||| || |||| |||| || || ||| | || || ||||| || Sbjct 17227 ATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATC 17168 Query 168731 TGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATC 168790 |||||||| || | | ||||| ||| |||| || ||||||||||| | | | | Sbjct 17167 TGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTT 17108 Query 168791 TTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGA 168850 | ||||| || | || | || || |||||| | |||||||| | | | | Sbjct 17107 CTACACTTTTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGT 17048 Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 17047 CTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCT 16988 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || ||| ||||||||||||||||||||||| Sbjct 16987 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATC 16928 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 ||||| || |||||||| ||| | |||||||| || |||||||||||||| |||||||| Sbjct 16927 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCCG 16868 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||||||| Sbjct 16867 TTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGT 16808 Query 169091 TCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGT 169150 || | ||||| ||| | | ||||| || || || || | |||||| || | ||| Sbjct 16807 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGT 16748 Query 169151 TACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGT 169210 |||| |||||||||||||||||||| || || ||||| || || || || || || || Sbjct 16747 TACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGC 16688 Query 169211 AGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCA 169270 |||| |||||||| ||||| ||||||||||| || | | | || |||||| |||| Sbjct 16687 CGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCG 16628 Query 169271 GTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAAC 169330 | | || || ||| || | ||||| || || | ||||| |||| ||||| |||||| Sbjct 16627 GCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAC 16568 Query 169331 TTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACA 169390 | || || || || || ||||||||||| || ||| | | || | ||| ||| Sbjct 16567 CTAAATGGTTTCAATTTCAACCAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACT 16508 Query 169391 TGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCT 169450 |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| ||| Sbjct 16507 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 16448 Query 169451 CACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||||||||| |||||| |||| ||| |||| || || Sbjct 16447 CACAACTTCCCTCTAGACCTAGCTGCTGTTGAGGCTCCA 16409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564436625858400