Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12-
31] 705 sequences; 184,155,600 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq497 526 3e-144
seq456 526 3e-144
seq219 526 3e-144
>seq497
Length=57642
Score = 526 bits (582), Expect = 3e-144
Identities = 699/971 (72%), Gaps = 0/971 (0%)
Strand=Plus/Minus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374
||||| |||||| | ||| |||| ||||||||||| | ||||| ||| | | | |
Sbjct 15616 ACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 15557
Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434
|| || | ||| || |||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 15556 GCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 15497
Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494
| || || ||| |||| ||| | | ||||| ||||| || || || ||||| || |
Sbjct 15496 CGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATT 15437
Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554
|||| ||| || || || || || || ||||| ||||||||||| ||| | |||||
Sbjct 15436 CCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGAT 15377
Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614
|||||||| ||||| ||||| |||| |||| || | | ||||| | ||||| |
Sbjct 15376 GAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTA 15317
Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674
|| || || | ||||||||||| || | | | |||||| | ||||||||
Sbjct 15316 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATT 15257
Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734
|||||| || || || ||||| | ||||| ||| || ||| | | || ||| |
Sbjct 15256 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATT 15197
Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794
||||| || ||| ||||||| |||||| || ||||||||||| || ||||||| |||
Sbjct 15196 GGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 15137
Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854
|||| ||||||||||||||||||||||||||||| || || |||||| ||||||| |||
Sbjct 15136 ATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCCGTTTCACATGCTAGGTGTAGCT 15077
Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914
||||| ||||| || || | || ||| ||||| ||||| | || || ||| | |
Sbjct 15076 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 15017
Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974
||||| || || || || | |||||| || | ||||||| ||||| ||||| ||
Sbjct 15016 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAA 14957
Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034
||||| |||||||| |||||||| |||||||| ||||| || | ||||||||||| ||
Sbjct 14956 GAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 14897
Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094
||||||||| || | | | || |||||| | || || | || || | ||||
Sbjct 14896 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATT 14837
Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154
||| ||||| | ||| | |||||||| |||||||| || |||||||| ||||||
Sbjct 14836 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 14777
Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214
|| || || || || || |||||| ||||||||| || || ||||| |
Sbjct 14776 CAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGT 14717
Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274
|| |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |
Sbjct 14716 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTA 14657
Query 216275 GCTGCTGCTGA 216285
||||||| |||
Sbjct 14656 GCTGCTGTTGA 14646
>seq456
Length=23154
Score = 526 bits (582), Expect = 3e-144
Identities = 699/971 (72%), Gaps = 0/971 (0%)
Strand=Plus/Minus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374
||||| |||||| | ||| |||| ||||||||||| | ||||| ||| | | | |
Sbjct 16589 ACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 16530
Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434
|| || | ||| || |||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 16529 GCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 16470
Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494
| || || ||| |||| ||| | | ||||| ||||| || || || ||||| || |
Sbjct 16469 CGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATT 16410
Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554
|||| ||| || || || || || || ||||| ||||||||||| ||| | |||||
Sbjct 16409 CCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGAT 16350
Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614
|||||||| ||||| ||||| |||| |||| || | | ||||| | ||||| |
Sbjct 16349 GAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTA 16290
Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674
|| || || | ||||||||||| || | | | |||||| | ||||||||
Sbjct 16289 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATT 16230
Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734
|||||| || || || ||||| | ||||| ||| || ||| | | || ||| |
Sbjct 16229 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATT 16170
Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794
||||| || ||| ||||||| |||||| || ||||||||||| || ||||||| |||
Sbjct 16169 GGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 16110
Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854
|||| ||||||||||||||||||||||||||||| || || |||||| ||||||| |||
Sbjct 16109 ATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCCGTTTCACATGCTAGGTGTAGCT 16050
Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914
||||| ||||| || || | || ||| ||||| ||||| | || || ||| | |
Sbjct 16049 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 15990
Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974
||||| || || || || | |||||| || | ||||||| ||||| ||||| ||
Sbjct 15989 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAA 15930
Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034
||||| |||||||| |||||||| |||||||| ||||| || | ||||||||||| ||
Sbjct 15929 GAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 15870
Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094
||||||||| || | | | || |||||| | || || | || || | ||||
Sbjct 15869 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATT 15810
Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154
||| ||||| | ||| | |||||||| |||||||| || |||||||| ||||||
Sbjct 15809 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 15750
Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214
|| || || || || || |||||| ||||||||| || || ||||| |
Sbjct 15749 CAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGT 15690
Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274
|| |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |
Sbjct 15689 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTA 15630
Query 216275 GCTGCTGCTGA 216285
||||||| |||
Sbjct 15629 GCTGCTGTTGA 15619
>seq219
Length=26726
Score = 526 bits (582), Expect = 3e-144
Identities = 699/971 (72%), Gaps = 0/971 (0%)
Strand=Plus/Minus
Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374
||||| |||||| | ||| |||| ||||||||||| | ||||| ||| | | | |
Sbjct 17386 ACTGAAAATCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 17327
Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434
|| || | ||| || |||| ||||| ||||| ||||| || ||||| || || ||
Sbjct 17326 GCAACTTCCGTTTTTATTATAGCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATT 17267
Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494
| || || ||| |||| ||| | | ||||| ||||| || || || ||||| || |
Sbjct 17266 CGTGAACCTGTTTCTGGATCTCTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATT 17207
Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554
|||| ||| || || || || || || ||||| ||||||||||| ||| | |||||
Sbjct 17206 CCTACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGAT 17147
Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614
|||||||| ||||| ||||| |||| |||| || | | ||||| | ||||| |
Sbjct 17146 GAATGGCTATACAACGGTGGTCCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGTA 17087
Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674
|| || || | ||||||||||| || | | | |||||| | ||||||||
Sbjct 17086 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATT 17027
Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734
|||||| || || || ||||| | ||||| ||| || ||| | | || ||| |
Sbjct 17026 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATT 16967
Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794
||||| || ||| ||||||| |||||| || ||||||||||| || ||||||| |||
Sbjct 16966 GGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 16907
Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854
|||| ||||||||||||||||||||||||||||| || || |||||| ||||||| |||
Sbjct 16906 ATTGTATTCCAGGCTGAGCACAACATTCTGATGCATCCGTTTCACATGCTAGGTGTAGCT 16847
Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914
||||| ||||| || || | || ||| ||||| ||||| | || || ||| | |
Sbjct 16846 GGTGTATTCGGCGGCTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTG 16787
Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974
||||| || || || || | |||||| || | ||||||| ||||| ||||| ||
Sbjct 16786 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAA 16727
Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034
||||| |||||||| |||||||| |||||||| ||||| || | ||||||||||| ||
Sbjct 16726 GAAACTTACAACATTGTAGCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCT 16667
Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094
||||||||| || | | | || |||||| | || || | || || | ||||
Sbjct 16666 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATT 16607
Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154
||| ||||| | ||| | |||||||| |||||||| || |||||||| ||||||
Sbjct 16606 TGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 16547
Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214
|| || || || || || |||||| ||||||||| || || ||||| |
Sbjct 16546 CAATCAGTAGTTGATAGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGT 16487
Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274
|| |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |
Sbjct 16486 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTA 16427
Query 216275 GCTGCTGCTGA 216285
||||||| |||
Sbjct 16426 GCTGCTGTTGA 16416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 745075033968400
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