Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_018085.1 Length=41992 Score E Sequences producing significant alignments: (Bits) Value seq616 87.8 5e-13 >seq616 Length=17366 Score = 87.8 bits (96), Expect = 5e-13 Identities = 167/244 (68%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 24911 GCTTTGGTTTTGGGTTTTGTAACTTGTCTGTTATAGTTGGTTTTATTAATATTAATTGAT 24970 || || |||||||| ||||||| | ||||| || ||||||| |||| || || Sbjct 2553 GCCTTTGTTTTGGGACTTGTAACAACGCCATTATAATTAGTTTTATCTATATGGATATAT 2494 Query 24971 TTTTCTTCAAAGTTAATATCTTCCCATGTTAATGCTAGCAATTCGCCAGTTCTTGCCCCG 25030 | ||| |||| |||||||||| ||| ||||| ||| | | ||| || | | ||| || Sbjct 2493 TCTTCAACAAAATTAATATCTTGCCACGTTAAAGCTCGTATTTCTCCTTTACGTGCACCA 2434 Query 25031 CTATA--ATAAAGAGTCGTAAAAAAGGCTTGATACAGTAAATCATCTACTACATGAATGA 25088 |||| |||| | | | ||||| |||| | | ||| | ||||| || | | Sbjct 2433 GTATAGAATAATAACTTG--AAAAATGCTTTTTTCTGTATGTTATCTAAATAATCATAAA 2376 Query 25089 ATTGTTTAAACTCATCAAACTCCCAAAAGTTTAATCGTTTATTCGATTCTTTTTCAAAGT 25148 ||| ||||| || || || |||||||||||||| ||| || |||| |||||| | Sbjct 2375 ATTTATTAAATTCGTCCAAAGTCCAAAAGTTTAATCTTTTTTTATTTTCTACTTCAAAAT 2316 Query 25149 TGCC 25152 | || Sbjct 2315 TACC 2312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134251676052340