Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq481 187 5e-42 >seq481 Length=6868915 Score = 187 bits (206), Expect = 5e-42 Identities = 442/661 (67%), Gaps = 10/661 (2%) Strand=Plus/Minus Query 48037 GAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGA 48096 || ||||||| |||| |||| ||||| || | || ||| ||| || || ||| || Sbjct 949437 GACAAACTCCCTCTCGATCTCGACGGCGTCGCAGACGATCGACTTCACTCGCTCCTCCGA 949378 Query 48097 GGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTC 48156 | | || | | |||| || || ||||| | |||||| || || | ||| |||||||| Sbjct 949377 GAGCTTCGTCCTCAGGAGCGTG---TAGAGAAGGCAGGCGAAATCGCAGTGTAAGCCTTC 949321 Query 48157 GTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAG 48216 || || ||| | | ||||||||||| | || ||||||| ||| | || || || Sbjct 949320 ATCTCGAGAGATCAACTCGTTGGAGAAGGTCAATCCCGGCATGAGCCCTCGCTTCTTCAG 949261 Query 48217 CCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGT 48276 |||||| || | ||| || ||||||||||| || || || ||||| ||| | Sbjct 949260 CCAGAAGATCGAGCAGAAGCTACCGGAGAAGAAGATACCTTCGACGCAGGCGAAAGCGAT 949201 Query 48277 GAGCCTCTCTCCGAAAGAA-GCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCT 48335 || || || |||| | | | || ||| |||||| | ||||| | ||| | Sbjct 949200 GATTCTTTCGGCGAAGGTCTGAGATCC-GTC---GATCCACTTCATGGCCCACTGTGCTT 949145 Query 48336 TCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGT 48395 ||||| || ||| || || || || || || |||||||| | | | ||| || Sbjct 949144 TCTTCGCGACGCAAGGGATGGTTTCGATTGCTCGGAAGAGATGGTCTCTCTCTTTGTTGT 949085 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 || | || ||| ||| || ||||||||| ||||| | ||||| || |||| Sbjct 949084 CCTTGATGTACGTATCGAGGAGGAGACTGTACATCTCCGAGTGGATGTTCTCGATCGCGA 949025 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||||||| || ||||| || | ||||| | || || || || | ||| || | Sbjct 949024 TCTGGAATCCATAGAAAGCACGCGCCTCCGAGACTTGTACATCGGACATGAACCT-GGAA 948966 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || |||||||| ||| || || ||||| || || ||||| || ||||| ||||| | | Sbjct 948965 GCAAGATTCTCCAGGACGATTCCGTCTGAGGCGGCGAAGAAAGCGAGGACGTGTTTGATG 948906 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACT 48634 || || |||||| || | ||||| | |||| | | |||||| ||||| ||| Sbjct 948905 AAGTGTCGCTCGCCGTCGTTGAGATTCTCCCAGTCGCGACCGTCTTGCGATAGGTCGACT 948846 Query 48635 TCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATATGTCCGGATAG 48694 |||||| | |||||||| || || || || |||||||| |||| || | || ||| Sbjct 948845 TCTTCCGCCGTCCAGAAAGATGCTTCGGCCTTCTTGTACATCTCCCAGATCTGTGGGTAG 948786 Query 48695 T 48695 | Sbjct 948785 T 948785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931524590867200