Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq481 120 6e-22 >seq481 Length=6868915 Score = 120 bits (132), Expect = 6e-22 Identities = 381/576 (66%), Gaps = 21/576 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || |||||||||||||||||||| || || |||||| || ||||| | || || Sbjct 948796 ATCTGGGAGATGTACAAGAAGGCCGAAGCATCTTTCTGGACGGCGGAAGAAGTCGACCTA 948855 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | ||| || |||| | ||| | | | ||||| || || |||| || Sbjct 948856 TCGCAAGACGGTCGCGACTGGGAGAATCTCAACGACGGCGAGCGACACTTCATCAAACAC 948915 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG-AGATT 25655 || | || ||||| || ||||| || || || || |||||||| ||| || || Sbjct 948916 GTCCTCGCTTTCTTCGCCGCCTCAGACGGAATCGTCCTGGAGAATCT-TGCTTCCAGGTT 948974 Query 25656 CACCAGGGAAGTGCAGTACGTGGAGGCCAAGTG-TTTCTACGGTTTCCAGATGGCCATCG 25714 || || || || | |||||| ||| |||||| || |||||||| || |||| Sbjct 948975 CATGTCCGATGTACAAGTCTCGGAGGCGC-GTGCTTTCTATGGATTCCAGATCGCGATCG 949033 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT----GATGACGTACATTACAGACGTC 25770 | || | ||||| ||| |||| || || || ||| |||||||| | ||| | Sbjct 949034 AGAACATCCACTCGGAGATGTA---CAGTCTCCTCCTCGAT-ACGTACATCAAGGACAAC 949089 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 |||||||| | || || | || ||||| ||| || || || || ||| || Sbjct 949090 AAAGAGAGAGACCATCTCTTCCGAGCAATCGAAACCATCCCTTGCGTCGCGAAGAAAGCA 949149 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGC-TACGTTTGGCGAGCGGCTGGTAGC 25889 | ||||||||||||||||||| | | || | | || || | ||| | | | || Sbjct 949150 CAGTGGGCCATGAAGTGGATC----GACGGATCTCAGACCTTCGCCGAAAGAATCATCGC 949205 Query 25890 CTTTG-CTGCTGTGGAGGGCATCTTTTTCAGCGGT-TCGTTTGCGGCCATCTTCTGGCTC 25947 || | |||| || || || ||||| ||| |||| | | ||| | ||||||||||| Sbjct 949206 TTTCGCCTGC-GTCGAAGGTATCTTCTTCTCCGGTAGCTTCTGC-TCGATCTTCTGGCTG 949263 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || ||| |||||| || || ||| ||||||||| | ||| | || || Sbjct 949264 AAGAAGCGAGGGCTCATGCCGGGATTGACCTTCTCCAACGAGTTGATCTCTCGAGATGAA 949323 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACG 26043 || | ||| | ||||| |||||||| ||||||||| Sbjct 949324 GGCTTACACTGCGATTTCGCCTGCCTTCTCTACACG 949359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836614555200