Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_019915.1 Length=40917 Score E Sequences producing significant alignments: (Bits) Value seq616 172 1e-38 >seq616 Length=17366 Score = 172 bits (190), Expect = 1e-38 Identities = 346/506 (68%), Gaps = 13/506 (3%) Strand=Plus/Minus Query 28128 GGTTTAGTACAGGTTACGCCTTCTACATTCAGAGCATTTAAAATT-CCTGGACATGGTAA 28186 ||||||||||| |||| |||| ||||||| | | || | || || |||||||||||||| Sbjct 7073 GGTTTAGTACAAGTTAAGCCTGCTACATTTA-ACCAGTATAAGTTACCTGGACATGGTAA 7015 Query 28187 TATCCTTAATGGTTTAGACAACTTAATGGCTGGTATTCATTATGCTAAATCAAGATACGG 28246 ||| ||| || ||||||||||| |||||||| ||||||||| || ||| || Sbjct 7014 TATTTGGAATCCGTTGGACAACTTAATTGCTGGTATGAGGTATGCTAAAGTAACATATGG 6955 Query 28247 TGGTAGTA---TGCTTAGTGTTATCGGCCACGGTCATGGTTATGCCACTGGCGGTCTTAT 28303 || | |||||| || || || ||| |||| || || || |||| Sbjct 6954 GCCTAAGAAAATGCTTAACCAAATTGGACATGGTTTACCTTATAAAACAGGTGGCGTTAT 6895 Query 28304 TAACACTGCTGGATTATATAATTTGGCAGAAGATGGGTACCCTGAGATAGTGATACCTAC 28363 ||| || || ||| || | ||||| ||||| | ||| |||| | || Sbjct 6894 AAACCAAGCCGGCACTTATCATCTTGCAGAGGATGGTCATAGTGAAGTAGTTGTTCCACT 6835 Query 28364 AGATCCAAGCAGACAATCAGATGCGATGAAA-TTGTTACATCTTGCTGCAAGTAAAATTA 28422 |||||||| | |||||||||||| || | || | | || |||||| |||| Sbjct 6834 TGATCCAAGTCGTGCGAGTGATGCGATGAAACTTATCACGTAT-GCGCAAAGTAAGATTA 6776 Query 28423 GTGGAAATAACAGAAATAAACGACCTAACCAATTACGTACACCTAATGTTACTAGTAATA 28482 | |||| | ||| ||||||||||| ||| | || || || || || ||||| Sbjct 6775 AAG---ATAAGAAAAACAAACGACCTAATCAAATGAGTTCATCTTCCAATAGTAATAATA 6719 Query 28483 CAGTTGATAATGCAGAATTACTACTACAAATGATAGAAAATCAACAGAAACAAATAAACG 28542 |||||| | ||| ||||| ||||||| | || ||||| |||||| || | Sbjct 6718 G---TGATAACACTTCTTTATTACTAGAAATGATTGCTAACCAACAAAAACAATTAGATA 6662 Query 28543 TGTTAATGGAAATAGCACGAAGTAATAAAACTATTGAAAAACAACCGAAAGGTTTTTCAG 28602 |||||| |||| ||||| |||||||| | |||||||||||| || ||||||||| ||| Sbjct 6661 CATTAATGCAAATCGCACGTAGTAATAAGAATATTGAAAAACAGCCAAAAGGTTTTACAG 6602 Query 28603 AACACGATGTAAGTCAGGCACAAGGT 28628 | | ||||||||| | || |||||| Sbjct 6601 AGCGTGATGTAAGTAAAGCGCAAGGT 6576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130811704851590