Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq699 86.0 1e-11 seq497 86.0 1e-11 seq385 86.0 1e-11 >seq699 Length=12507 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 11131 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 11189 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 11190 CCCCGTCAGTCC 11201 >seq497 Length=57642 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 44041 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 43983 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 43982 CCCCGTCAGTCC 43971 >seq385 Length=11279646 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 169728 GGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG 169787 ||||||||| ||| ||||| ||||| ||||||||||| |||||| | ||||||||||| Sbjct 6574349 GGATTGTAGTTCAATTGGT-TAGAGCACCGCCCTGTCAAGGCGGAAGCTGCGGGTTCGAG 6574407 Query 169788 CCCCGTCAGTCC 169799 |||||||||||| Sbjct 6574408 CCCCGTCAGTCC 6574419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777625147118000