Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq497 544 2e-150 seq456 544 2e-150 seq219 544 2e-150 >seq497 Length=57642 Score = 544 bits (602), Expect = 2e-150 Identities = 719/995 (72%), Gaps = 2/995 (0%) Strand=Plus/Plus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || ||||||||||| || || || |||||||| || || | Sbjct 14644 CCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCA 14703 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| |||||||| || || || || |||| | | | Sbjct 14704 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACGCGTCCTTGACTAT 14763 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | |||||||| || ||||||||||| | |||||||||||| ||| | || | Sbjct 14764 CAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTA 14823 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 |||| ||||||||||||||| || ||||| || || | |||||||| | | ||| | Sbjct 14824 AAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAG 14883 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| ||||||||||| |||| Sbjct 14884 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAA 14943 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 | |||||||| ||||| |||||||| || ||||||| | || || | | ||| | Sbjct 14944 TGTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 15003 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||| ||||||||| || | | Sbjct 15004 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGC 15063 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| ||||||||||| |||||||| ||||| |||||||||| Sbjct 15064 CGCCGAATACACCAGCTACACCTAGCATGTGAAACGGATGCATCAGAATGTTGTGCTCAG 15123 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 ||||||| || | ||| ||||||| || || || || || | |||||| ||||||||| Sbjct 15124 CCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAA 15183 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 || || || |||| || || | | ||| |||||||| ||||| || |||||||| | Sbjct 15184 AACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 15243 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || || | |||||||||||||| || | Sbjct 15244 AATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 15303 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||| ||| | || |||| | ||||| | || | |||| | ||||| |||| Sbjct 15304 CCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 15363 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| ||||||||||||| | ||||||||||| || ||||| || || | || || | Sbjct 15364 TGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAG 15423 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | | |||| | ||| ||||| || || ||||| ||||| | || || |||| Sbjct 15424 CTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCATAAAGAAGAGATCCAG 15483 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 || ||||| || || ||||| || || || || || || ||| || || ||||||| Sbjct 15484 AAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCTATAATAA 15543 Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418 || | || |||| ||| ||| | || ||||| | || || |||||||| | ||| Sbjct 15544 AAACGGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAA 15602 Query 22419 AGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 ||||| || | ||| ||| | |||| ||| || Sbjct 15603 AGACGATTTTCAGTGCTGGTTATCCAGTTACAGAA 15637 >seq456 Length=23154 Score = 544 bits (602), Expect = 2e-150 Identities = 719/995 (72%), Gaps = 2/995 (0%) Strand=Plus/Plus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || ||||||||||| || || || |||||||| || || | Sbjct 15617 CCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCA 15676 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| |||||||| || || || || |||| | | | Sbjct 15677 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACGCGTCCTTGACTAT 15736 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | |||||||| || ||||||||||| | |||||||||||| ||| | || | Sbjct 15737 CAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTA 15796 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 |||| ||||||||||||||| || ||||| || || | |||||||| | | ||| | Sbjct 15797 AAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAG 15856 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| ||||||||||| |||| Sbjct 15857 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAA 15916 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 | |||||||| ||||| |||||||| || ||||||| | || || | | ||| | Sbjct 15917 TGTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 15976 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||| ||||||||| || | | Sbjct 15977 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGC 16036 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| ||||||||||| |||||||| ||||| |||||||||| Sbjct 16037 CGCCGAATACACCAGCTACACCTAGCATGTGAAACGGATGCATCAGAATGTTGTGCTCAG 16096 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 ||||||| || | ||| ||||||| || || || || || | |||||| ||||||||| Sbjct 16097 CCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAA 16156 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 || || || |||| || || | | ||| |||||||| ||||| || |||||||| | Sbjct 16157 AACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 16216 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || || | |||||||||||||| || | Sbjct 16217 AATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 16276 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||| ||| | || |||| | ||||| | || | |||| | ||||| |||| Sbjct 16277 CCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 16336 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| ||||||||||||| | ||||||||||| || ||||| || || | || || | Sbjct 16337 TGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAG 16396 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | | |||| | ||| ||||| || || ||||| ||||| | || || |||| Sbjct 16397 CTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCATAAAGAAGAGATCCAG 16456 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 || ||||| || || ||||| || || || || || || ||| || || ||||||| Sbjct 16457 AAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCTATAATAA 16516 Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418 || | || |||| ||| ||| | || ||||| | || || |||||||| | ||| Sbjct 16517 AAACGGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAA 16575 Query 22419 AGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 ||||| || | ||| ||| | |||| ||| || Sbjct 16576 AGACGATTTTCAGTGCTGGTTATCCAGTTACAGAA 16610 >seq219 Length=26726 Score = 544 bits (602), Expect = 2e-150 Identities = 719/995 (72%), Gaps = 2/995 (0%) Strand=Plus/Plus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || ||||||||||| || || || |||||||| || || | Sbjct 16414 CCTCAACAGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCATGCATAACTTCCA 16473 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| |||||||| || || || || |||| | | | Sbjct 16474 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAAGTATTAATAACGCGTCCTTGACTAT 16533 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | |||||||| || ||||||||||| | |||||||||||| ||| | || | Sbjct 16534 CAACTACTGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTA 16593 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 |||| ||||||||||||||| || ||||| || || | |||||||| | | ||| | Sbjct 16594 AAGCAGTAAACCAAATACCTACTACCGGCCAAGCCGCTAAGAAGAAATGTAAAGAACGAG 16653 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| ||||||||||| |||| Sbjct 16654 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCGTGAGCAGCTACAA 16713 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 | |||||||| ||||| |||||||| || ||||||| | || || | | ||| | Sbjct 16714 TGTTGTAAGTTTCTTCTTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 16773 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||| ||||||||| || | | Sbjct 16774 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTAAATAGGGAGC 16833 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| ||||||||||| |||||||| ||||| |||||||||| Sbjct 16834 CGCCGAATACACCAGCTACACCTAGCATGTGAAACGGATGCATCAGAATGTTGTGCTCAG 16893 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 ||||||| || | ||| ||||||| || || || || || | |||||| ||||||||| Sbjct 16894 CCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAA 16953 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 || || || |||| || || | | ||| |||||||| ||||| || |||||||| | Sbjct 16954 AACTTCCTTGACCAATTGGGTAGATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTG 17013 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || || | |||||||||||||| || | Sbjct 17014 AATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGAC 17073 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||| ||| | || |||| | ||||| | || | |||| | ||||| |||| Sbjct 17074 CCATATAACAAGCTACACCAAGTAAAAAGTGTAGAACAATTAGTTCATAAGGACCACCGT 17133 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| ||||||||||||| | ||||||||||| || ||||| || || | || || | Sbjct 17134 TGTATAGCCATTCATCAACGGATGCAGCTTCCCAGATCGGGTAAAAATGCAAACCAATAG 17193 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | | |||| | ||| ||||| || || ||||| ||||| | || || |||| Sbjct 17194 CTGCAGAAGTAGGAATAATGGCACCTGAAATAATATTGTTTCCATAAAGAAGAGATCCAG 17253 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 || ||||| || || ||||| || || || || || || ||| || || ||||||| Sbjct 17254 AAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGAAAGCTATAATAA 17313 Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418 || | || |||| ||| ||| | || ||||| | || || |||||||| | ||| Sbjct 17314 AAACGGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAA 17372 Query 22419 AGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 ||||| || | ||| ||| | |||| ||| || Sbjct 17373 AGACGATTTTCAGTGCTGGTTATCCAGTTACAGAA 17407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146206775964900