Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq497 551 6e-152 seq456 551 6e-152 seq219 551 6e-152 >seq497 Length=57642 Score = 551 bits (610), Expect = 6e-152 Identities = 698/957 (73%), Gaps = 12/957 (1%) Strand=Plus/Minus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| | | | | || || | || ||| | Sbjct 15595 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATA 15536 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 || ||||||||||| ||||| ||||| |||||||||||||||||||| || |||| ||| Sbjct 15535 GCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 15476 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 | | ||||| ||||| || || || ||||| || | |||| ||| || |||||| Sbjct 15475 CTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGT 15416 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | || || || || || |||||||| ||| | ||||||| ||| | ||||| |||||| Sbjct 15415 TTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGT 15356 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGT 155307 |||| |||| | || | ||||| | | || | ||| | | | |||||| Sbjct 15355 CCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGT---AGCTTGTTATATGGGTCGT 15299 Query 155308 CAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 155367 ||||||||||| || |||||| || |||||||||||||| ||||||||| || || Sbjct 15298 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 15239 Query 155368 CCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCT 155427 || || | ||||| ||||| ||| | | || || | |||||||| ||| ||| Sbjct 15238 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCT 15179 Query 155428 GATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAA 155487 |||| |||||||| || |||||||||||||| |||| |||| | || ||||| || || Sbjct 15178 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAG 15119 Query 155488 CACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCT 155547 ||||| || || ||||| || || |||||||| || ||||| ||||| ||||| || || Sbjct 15118 CACAACATTCTGATGCATCCGTTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCC 15059 Query 155548 CTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAG 155607 || || ||||||||| ||||| ||||| || ||| | ||| | ||||| || || Sbjct 15058 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 14999 Query 155608 CAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTT 155667 | || ||| || | ||||||| ||||| ||||||||||||||||| |||||||| Sbjct 14998 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTA 14939 Query 155668 GCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGA 155727 |||||||| || || || || || | |||||||| ||||| |||||||| || | Sbjct 14938 GCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGT 14879 Query 155728 AGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGT 155787 | | || |||||| | || || ||||| || || | || ||| |||||| | ||| Sbjct 14878 TCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGT 14819 Query 155788 GTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCT 155847 | || ||||| |||||||| || |||||||| |||||||| || ||||| || | Sbjct 14818 ATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGA---T 14762 Query 155848 AGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATG 155904 ||| || || || ||| ||||| || ||| ||||||| ||| ||||||||| Sbjct 14761 AGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATG 14702 Query 155905 GAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961 ||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||| |||| Sbjct 14701 GAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 14645 >seq456 Length=23154 Score = 551 bits (610), Expect = 6e-152 Identities = 698/957 (73%), Gaps = 12/957 (1%) Strand=Plus/Minus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| | | | | || || | || ||| | Sbjct 16568 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATA 16509 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 || ||||||||||| ||||| ||||| |||||||||||||||||||| || |||| ||| Sbjct 16508 GCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 16449 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 | | ||||| ||||| || || || ||||| || | |||| ||| || |||||| Sbjct 16448 CTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGT 16389 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | || || || || || |||||||| ||| | ||||||| ||| | ||||| |||||| Sbjct 16388 TTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGT 16329 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGT 155307 |||| |||| | || | ||||| | | || | ||| | | | |||||| Sbjct 16328 CCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGT---AGCTTGTTATATGGGTCGT 16272 Query 155308 CAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 155367 ||||||||||| || |||||| || |||||||||||||| ||||||||| || || Sbjct 16271 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 16212 Query 155368 CCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCT 155427 || || | ||||| ||||| ||| | | || || | |||||||| ||| ||| Sbjct 16211 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCT 16152 Query 155428 GATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAA 155487 |||| |||||||| || |||||||||||||| |||| |||| | || ||||| || || Sbjct 16151 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAG 16092 Query 155488 CACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCT 155547 ||||| || || ||||| || || |||||||| || ||||| ||||| ||||| || || Sbjct 16091 CACAACATTCTGATGCATCCGTTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCC 16032 Query 155548 CTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAG 155607 || || ||||||||| ||||| ||||| || ||| | ||| | ||||| || || Sbjct 16031 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 15972 Query 155608 CAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTT 155667 | || ||| || | ||||||| ||||| ||||||||||||||||| |||||||| Sbjct 15971 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTA 15912 Query 155668 GCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGA 155727 |||||||| || || || || || | |||||||| ||||| |||||||| || | Sbjct 15911 GCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGT 15852 Query 155728 AGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGT 155787 | | || |||||| | || || ||||| || || | || ||| |||||| | ||| Sbjct 15851 TCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGT 15792 Query 155788 GTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCT 155847 | || ||||| |||||||| || |||||||| |||||||| || ||||| || | Sbjct 15791 ATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGA---T 15735 Query 155848 AGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATG 155904 ||| || || || ||| ||||| || ||| ||||||| ||| ||||||||| Sbjct 15734 AGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATG 15675 Query 155905 GAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961 ||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||| |||| Sbjct 15674 GAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 15618 >seq219 Length=26726 Score = 551 bits (610), Expect = 6e-152 Identities = 698/957 (73%), Gaps = 12/957 (1%) Strand=Plus/Minus Query 155011 GGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTGCTGCTACATGCTTCATTGTC 155070 || ||||| |||||| | ||||||||| | | | | || || | || ||| | Sbjct 17365 GGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACTTCCGTTTTTATTATA 17306 Query 155071 GCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCT 155130 || ||||||||||| ||||| ||||| |||||||||||||||||||| || |||| ||| Sbjct 17305 GCTTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCT 17246 Query 155131 TTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGT 155190 | | ||||| ||||| || || || ||||| || | |||| ||| || |||||| Sbjct 17245 CTTCTTTATGGAAACAATATTATTTCAGGTGCCATTATTCCTACTTCTGCAGCTATTGGT 17186 Query 155191 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGT 155250 | || || || || || |||||||| ||| | ||||||| ||| | ||||| |||||| Sbjct 17185 TTGCATTTTTACCCGATCTGGGAAGCTGCATCCGTTGATGAATGGCTATACAACGGTGGT 17126 Query 155251 CCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGT---GGTCGT 155307 |||| |||| | || | ||||| | | || | ||| | | | |||||| Sbjct 17125 CCTTATGAACTAATTGTTCTACACTTTTTACTTGGTGT---AGCTTGTTATATGGGTCGT 17069 Query 155308 CAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCA 155367 ||||||||||| || |||||| || |||||||||||||| ||||||||| || || Sbjct 17068 GAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCT 17009 Query 155368 CCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCT 155427 || || | ||||| ||||| ||| | | || || | |||||||| ||| ||| Sbjct 17008 CCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGTTTTTCT 16949 Query 155428 GATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAA 155487 |||| |||||||| || |||||||||||||| |||| |||| | || ||||| || || Sbjct 16948 GATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAG 16889 Query 155488 CACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCT 155547 ||||| || || ||||| || || |||||||| || ||||| ||||| ||||| || || Sbjct 16888 CACAACATTCTGATGCATCCGTTTCACATGCTAGGTGTAGCTGGTGTATTCGGCGGCTCC 16829 Query 155548 CTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAG 155607 || || ||||||||| ||||| ||||| || ||| | ||| | ||||| || || Sbjct 16828 CTATTTAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAA 16769 Query 155608 CAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTT 155667 | || ||| || | ||||||| ||||| ||||||||||||||||| |||||||| Sbjct 16768 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAAGAAGAAACTTACAACATTGTA 16709 Query 155668 GCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGA 155727 |||||||| || || || || || | |||||||| ||||| |||||||| || | Sbjct 16708 GCTGCTCACGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGT 16649 Query 155728 AGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGT 155787 | | || |||||| | || || ||||| || || | || ||| |||||| | ||| Sbjct 16648 TCTTTACATTTCTTCTTAGCGGCTTGGCCGGTAGTAGGTATTTGGTTTACTGCTTTAGGT 16589 Query 155788 GTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCT 155847 | || ||||| |||||||| || |||||||| |||||||| || ||||| || | Sbjct 16588 ATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCAGTAGTTGA---T 16532 Query 155848 AGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATG 155904 ||| || || || ||| ||||| || ||| ||||||| ||| ||||||||| Sbjct 16531 AGTCAAGGACGCGTTATTAATACTTGGGCTGATATTATTAACCGTGCTAACCTTGGTATG 16472 Query 155905 GAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961 ||||| ||||| || ||||| ||||||||||||||||| ||||| ||||||| |||| Sbjct 16471 GAAGTTATGCATGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCTGTTGAG 16415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584830046139800