Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_021297.1 Length=52057 Score E Sequences producing significant alignments: (Bits) Value seq117 125 2e-24 >seq117 Length=8551 Score = 125 bits (138), Expect = 2e-24 Identities = 131/171 (77%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 41032 GGCCTTGTCGATGGCTTTGGACACGTCGAGCGACTTCGGGAACCCGCTGCCGTACAGCCA 41091 ||||| |||||| || || |||||| | ||||||||||| || ||||| ||||| Sbjct 7979 GGCCT-GTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCA 7921 Query 41092 CGCGATCGAGTCGCGGACCTCGAACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCA 41151 |||| |||||||| | ||||| || ||||| ||||| || | || || |||||||| Sbjct 7920 GGCGAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCA 7861 Query 41152 GGTGCGCGGGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACCCG 41202 |||||| | ||| ||||| ||| | ||| |||||||||||||| ||||| Sbjct 7860 GGTGCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCG 7810 Score = 84.2 bits (92), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 3/147 (2%) Strand=Plus/Minus Query 40865 GTGCCGATGCGGCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCC 40924 || ||||| | ||| ||||| | ||| | || || || || | | | ||||||||| Sbjct 8477 GTCCCGATCCTGCACGCGTCCACGTTGATTGCTCCGGTCCCATACGCGAGGACGTTCCTA 8418 Query 40925 GCCACCGTGCCCACG---AGAGGCTTACGCGCGACCACGATGGGCTCGAACGCCGGTTTC 40981 || || || | || || |||||||| |||| |||||| ||||| ||||| || || Sbjct 8417 GCAACGGTCTTCTCGGCGAGGGGCTTACGGGCGAGCACGATAGGCTCAAACGCGGGCTTT 8358 Query 40982 AGCGTCGTGCCCCAGCCCTGCCACTGC 41008 || | |||||||||||| | ||||||| Sbjct 8357 AGAGCCGTGCCCCAGCCGTCCCACTGC 8331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166459406410990