Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_021302.1 Length=47109 Score E Sequences producing significant alignments: (Bits) Value seq117 113 1e-20 >seq117 Length=8551 Score = 113 bits (124), Expect = 1e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 38050 AAACCGGGCGGGCACATGTTGGCGTTCGGCGGTTCGCGCACCTGGCACCGGCTGGCGGCG 38109 || || || || ||||| || ||||| || | |||||||||||||| || || | Sbjct 7819 AAGCCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTC 7878 Query 38110 GCGATCGAGGACGCCGGGTTCGAGGTCCGCGACTCGATCGCCTGGCTGTACGGATCCGGG 38169 || ||||| ||||| || ||||| | |||||||| |||||||||| ||||| || || Sbjct 7879 GCCATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGA 7938 Query 38170 TTCCCGAAGTCGCTCGACGTATCGAAGGCCATCGACA 38206 ||||||||||| | ||||| |||||| ||||||| Sbjct 7939 TTCCCGAAGTCCTTGGACGTGGGGAAGGCAATCGACA 7975 Score = 91.5 bits (100), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 3/136 (2%) Strand=Plus/Plus Query 38346 GCAGTGGCAGGGCTGGGGCACGGCACTGAAACCGGCGTTCGAGCCGATCGTGGTCGCGCG 38405 ||||||| | |||||||||||||| || || || ||||| ||||| |||||| |||| || Sbjct 8331 GCAGTGGGACGGCTGGGGCACGGCTCTAAAGCCCGCGTTTGAGCCTATCGTGCTCGCCCG 8390 Query 38406 TAAACCGCTGGC---GGGCACCGTGGCTGCGAATGTGCTCGGGCACGGCACCGGCGCGCT 38462 ||| || || || | ||||| ||| ||| || |||| | | || ||||| || | Sbjct 8391 TAAGCCCCTCGCCGAGAAGACCGTTGCTAGGAACGTCCTCGCGTATGGGACCGGAGCAAT 8450 Query 38463 CAACATCGACGCCTGC 38478 |||| | ||||| ||| Sbjct 8451 CAACGTGGACGCGTGC 8466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150625938967910