Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq117 188 3e-43 >seq117 Length=8551 Score = 188 bits (208), Expect = 3e-43 Identities = 214/280 (76%), Gaps = 13/280 (5%) Strand=Plus/Plus Query 58329 CGTCGACTCCATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGA 58388 ||| ||| | |||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct 7710 CGTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGA 7769 Query 58389 CGGCTCGGGCATCGCCT-TCGATGTCGAGATGTG--GGAGCAATGTCTGCGGGTCCTCAA 58445 |||| | || || || || || ||| | | ||| || ||||| ||||| Sbjct 7770 CGGC-----CTTCCCCCGTCACTG--GA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAA 7820 Query 58446 GCCGGGTGGGCACCTGCTCGCCTTCGGTGGCTCCCGCACCTGGCACCGGCTGACCGTGGC 58505 ||| ||||| ||| | ||| ||||||||| |||||||||||||||| || |||| || Sbjct 7821 GCCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGC 7880 Query 58506 CATCGAGGACGCGGGCTTCGAGATTCGTGACTCCATCGCCTGGCTCTACGGCAGCGGGTT 58565 |||||| ||||| || ||||| || || |||||| |||||||||| ||||| || || Sbjct 7881 CATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATT 7940 Query 58566 CCCGAAGTCGCTCGACGTATCGAAGGCCATCGACAAGGCC 58605 ||||||||| | ||||| |||||| |||||| ||||| Sbjct 7941 CCCGAAGTCCTTGGACGTGGGGAAGGCAATCGAC-AGGCC 7979 Score = 91.5 bits (100), Expect = 7e-14 Identities = 122/168 (73%), Gaps = 9/168 (5%) Strand=Plus/Plus Query 58717 GTTACCGCCCCGGCGACC---GAGGCGGCGCGGCAGTGGCAGGGCTGGGGCACAGCGCTC 58773 || |||||||| ||||| ||||| |||| ||||| | ||||||||||| || || Sbjct 8302 GTCACCGCCCCCGCGACTCCTGAGGCCGCGC---AGTGGGACGGCTGGGGCACGGCTCTA 8358 Query 58774 AAGCCCGCGTTCGAGCCCATCGTGGTTGCGCGCAAGCCTCTCGTAG---GCACGGTGGCG 58830 ||||||||||| ||||| |||||| | || || ||||| |||| | || || || Sbjct 8359 AAGCCCGCGTTTGAGCCTATCGTGCTCGCCCGTAAGCCCCTCGCCGAGAAGACCGTTGCT 8418 Query 58831 GCGAATGTCCTGGAGCACGGCACCGGCGCGCTCAACATCGACGCCTGC 58878 ||| ||||| | | | || ||||| || ||||| | ||||| ||| Sbjct 8419 AGGAACGTCCTCGCGTATGGGACCGGAGCAATCAACGTGGACGCGTGC 8466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242228318710985