Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_022055.1 Length=59179 Score E Sequences producing significant alignments: (Bits) Value seq117 154 6e-33 >seq117 Length=8551 Score = 154 bits (170), Expect = 6e-33 Identities = 210/283 (74%), Gaps = 14/283 (5%) Strand=Plus/Plus Query 44728 TCTACCACGGCGACTGCCTGCACGTGCTCGCCGAGCTGCCCGATCGCAGC-GTCGACGCC 44786 || |||||||||||||| | | || | | || |||||| || | | || ||||| Sbjct 7661 TCCACCACGGCGACTGCATCGAGGTCATGAACCAGATGCCCGC-CGAATCCGTTGACGCA 7719 Query 44787 GTGGTTTGCGACCCACCCTACGAGCTGGAGTTCATGGGCAAGAAGTGGGACGGCTCGGGC 44846 | || |||||| ||||||| || | |||||||||||||| ||||||||| | Sbjct 7720 ATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGACGGC-----C 7774 Query 44847 ATCGCCTTCGACGTCGAGATGTG--GAAGCAATGCCTGCGGGTCCTCAAACCCGGTGGGC 44904 || || || | || ||| | ||||| ||| ||||| ||||| |||||||| | Sbjct 7775 TTCCCCCGTCAC-TGGA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAGCCCGGTGGAC 7831 Query 44905 ACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTCG-CGTCGGCCATCGAGGAC 44963 || | ||| ||||| ||| |||||||||||||||| |||| |||| |||||||| ||| Sbjct 7832 ACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTC-GCCATCGAAGAC 7890 Query 44964 GCGGGCTTCGAGATCCGCGACTCCATCGCCTGGCTCTACGGGT 45006 || || ||||| || ||||||||| |||||||||| ||||||| Sbjct 7891 GCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGT 7933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189249615612610