Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq117 150 9e-32 >seq117 Length=8551 Score = 150 bits (166), Expect = 9e-32 Identities = 201/277 (73%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 59528 CGTCGACTCCATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGA 59587 ||| ||| | |||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct 7710 CGTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGA 7769 Query 59588 CGGCTCGGGCATCGCTTTCGATGTCGAGATGTG--GGAGCAATGTCTGCGGGTCCTCAAG 59645 |||| | | || || || || ||| | | ||| || ||||| |||||| Sbjct 7770 CGGC-CTTCCCCCG---TCACTG--GA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAG 7821 Query 59646 CCGGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGNNNNNNNNNNNNTGCGCG 59705 || ||||| ||| | ||| ||||| ||| ||||||||||| ||| Sbjct 7822 CCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGCC 7881 Query 59706 GTCGAGGACGCGGGCTTCGAGATCCGTGACTCCATCGCCTGGCTCTACGGGTCCGGGTTC 59765 |||| ||||| || ||||| || || |||||| |||||||||| |||||||| || ||| Sbjct 7882 ATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATTC 7941 Query 59766 CCGAAGTCGCTCGACGTGTCCAAGGCCATCGACAAGC 59802 |||||||| | |||||| ||||| ||||||| || Sbjct 7942 CCGAAGTCCTTGGACGTGGGGAAGGCAATCGACAGGC 7978 Score = 82.4 bits (90), Expect = 4e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 60198 CAGTGGCAGGGATGGGGCACAGCTCTCAAGCCCGCGTTCGAGCCCATCGTGGTCGCACGT 60257 |||||| | || |||||||| ||||| ||||||||||| ||||| |||||| |||| ||| Sbjct 8332 CAGTGGGACGGCTGGGGCACGGCTCTAAAGCCCGCGTTTGAGCCTATCGTGCTCGCCCGT 8391 Query 60258 AAGCCTCTCG 60267 ||||| |||| Sbjct 8392 AAGCCCCTCG 8401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247447473866640