Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_022065.1 Length=74533 Score E Sequences producing significant alignments: (Bits) Value seq117 165 4e-36 >seq117 Length=8551 Score = 165 bits (182), Expect = 4e-36 Identities = 205/274 (75%), Gaps = 10/274 (4%) Strand=Plus/Plus Query 58227 CGTCGACTCCATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGA 58286 ||| ||| | |||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct 7710 CGTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGA 7769 Query 58287 CGGCTCGGGCATCGCTTTCGATGTCGAGATGTG--GGAGCAATGTCTGCGGGTCCTCAAG 58344 |||| | | || || || || ||| | | ||| || ||||| |||||| Sbjct 7770 CGGC-CTTCCCCCG---TCACTG--GA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAG 7821 Query 58345 CCGGGTGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTGACCGTGGCC 58404 || ||||| ||| | ||| ||||| ||| |||||||||||||||| || |||| ||| Sbjct 7822 CCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGCC 7881 Query 58405 ATCGAGGACGCGGGCTTCGAGATTCGTGACTCCATCGCGTGGCTCTACGGCAGCGGGTTC 58464 ||||| ||||| || ||||| || || |||||| |||| ||||| ||||| || ||| Sbjct 7882 ATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATTC 7941 Query 58465 CCGAAGTCGCTCGACGTATCCAAGGCCATTGACA 58498 |||||||| | ||||| ||||| || |||| Sbjct 7942 CCGAAGTCCTTGGACGTGGGGAAGGCAATCGACA 7975 Score = 96.9 bits (106), Expect = 2e-15 Identities = 130/179 (73%), Gaps = 9/179 (5%) Strand=Plus/Plus Query 58606 GTCACTGCCCCGTCGACC---GACGCCGCCCAGCAGTGGCAGGGCTGGGGCACGGCGCTC 58662 ||||| ||||| |||| || ||||| ||||||| | |||||||||||||| || Sbjct 8302 GTCACCGCCCCCGCGACTCCTGAGGCCGC---GCAGTGGGACGGCTGGGGCACGGCTCTA 8358 Query 58663 AAGCCCGCGTTCGAGCCCATCGTGGTCGCACGGAAACCCCTGGC---GGGCACGGTGGCG 58719 ||||||||||| ||||| |||||| |||| || || ||||| || | || || || Sbjct 8359 AAGCCCGCGTTTGAGCCTATCGTGCTCGCCCGTAAGCCCCTCGCCGAGAAGACCGTTGCT 8418 Query 58720 GCGAACGTCCTGGAGCACGGTACGGGGGCGTTGAACATCGACGCCTGCCGCATCGGCAC 58778 ||||||||| | | | || || || || | ||| | ||||| ||| | ||||| || Sbjct 8419 AGGAACGTCCTCGCGTATGGGACCGGAGCAATCAACGTGGACGCGTGCAGGATCGGGAC 8477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238378751787470