Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_022329.1 Length=53636 Score E Sequences producing significant alignments: (Bits) Value seq117 123 9e-24 >seq117 Length=8551 Score = 123 bits (136), Expect = 9e-24 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 41260 CCGGTCGATGGCCTTGGATACGTCGAGCGACTTCGGGAAACCGCTGCCGTAGAGCCAGGC 41319 || |||||| ||||| ||||| | ||||||||||| || ||||| |||||||| Sbjct 7977 CCTGTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCAGGC 7918 Query 41320 GATGGAGTCGCGGAGCTCAAACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCAGGT 41379 || ||||||||| | || || || ||||| ||||| || | || || ||||||||||| Sbjct 7917 GAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCAGGT 7858 Query 41380 GCGGGAGCCGCCGAAGGCGAGCAGGTACCCACCCGGCTTGAGGACCCG 41427 ||||| ||| ||||| ||| | || ||||| |||||||| ||||| Sbjct 7857 GCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCG 7810 Score = 89.7 bits (98), Expect = 2e-13 Identities = 121/167 (72%), Gaps = 9/167 (5%) Strand=Plus/Minus Query 40990 GCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCCGCCACCGTGCC 41049 ||| ||||| | ||| | || || || || | | | ||||||||| || || || Sbjct 8466 GCACGCGTCCACGTTGATTGCTCCGGTCCCATACGCGAGGACGTTCCTAGCAACGGTCTT 8407 Query 41050 C---GCCAGGGGTTTCCGCGCGACCACGATCGGCTCAAACGATGGTTTTAGCGCGGTACC 41106 | || ||||| || || |||| |||||| |||||||||| || ||||| || || || Sbjct 8406 CTCGGCGAGGGGCTTACGGGCGAGCACGATAGGCTCAAACGCGGGCTTTAGAGCCGTGCC 8347 Query 41107 CCAGCCCTGCCACTGCTTGGCGGCGTCGG---TCGCGGGGGCGGTGA 41150 |||||| | ||||||| ||||| || | ||||||||||||||| Sbjct 8346 CCAGCCGTCCCACTGC---GCGGCCTCAGGAGTCGCGGGGGCGGTGA 8303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171512164109580