Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_022981.1 Length=76323 Score E Sequences producing significant alignments: (Bits) Value seq117 152 3e-32 >seq117 Length=8551 Score = 152 bits (168), Expect = 3e-32 Identities = 201/272 (74%), Gaps = 10/272 (4%) Strand=Plus/Plus Query 59394 CGTCGACTCCATCATTACCGACCCGCCCTATGAACTGGGATTCATGGGCAAGAAGTGGGA 59453 ||| ||| | ||| | |||||||||||||| | || || |||||||||||||| ||||| Sbjct 7710 CGTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGA 7769 Query 59454 CGGCTCGGGCATCGCTTTCGATGTCGAGATGTG--GGAGCAATGTCTGCGGGTCCTCAAG 59511 |||| | | || || || || ||| | | ||| || ||||| |||||| Sbjct 7770 CGGC-CTTCCCCCG---TCACTG--GA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAG 7821 Query 59512 CCGGGTGGGCACCTGCTCGCCTTCGGTGGCTCCCGCACCTGGCACCGGCTGACCGTGGCC 59571 || ||||| ||| | ||| ||||||||| |||||||||||||||| || |||| ||| Sbjct 7822 CCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGCC 7881 Query 59572 ATTGAGGACGCGGGCTTCGAGATTCGTGACAGCATCGCCTGGCTGTACGGCAGCGGGTTC 59631 || || ||||| || ||||| || || ||| | |||||||||| ||||| || ||| Sbjct 7882 ATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATTC 7941 Query 59632 CCGAAGTCGCTCGACGTGTCCAAGGCCATCGA 59663 |||||||| | |||||| ||||| ||||| Sbjct 7942 CCGAAGTCCTTGGACGTGGGGAAGGCAATCGA 7973 Score = 82.4 bits (90), Expect = 4e-11 Identities = 100/136 (74%), Gaps = 3/136 (2%) Strand=Plus/Plus Query 60054 GCAGTGGCAGGGGTGGGGCACTGCGCTCAAGCCCGCGTTCGAGCCGATTGTGGTCGCGCG 60113 ||||||| | || |||||||| || || ||||||||||| ||||| || ||| |||| || Sbjct 8331 GCAGTGGGACGGCTGGGGCACGGCTCTAAAGCCCGCGTTTGAGCCTATCGTGCTCGCCCG 8390 Query 60114 GAAACCGCTGGC---GGGCACGGTGGCTGCGAACGTGCTGGCCCACGGCACCGGCGCACT 60170 || || || || | || || ||| |||||| || || | || ||||| ||| | Sbjct 8391 TAAGCCCCTCGCCGAGAAGACCGTTGCTAGGAACGTCCTCGCGTATGGGACCGGAGCAAT 8450 Query 60171 CAACATCGACGCCTGC 60186 |||| | ||||| ||| Sbjct 8451 CAACGTGGACGCGTGC 8466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244106702571420