Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq334 194 7e-45 >seq334 Length=7771 Score = 194 bits (214), Expect = 7e-45 Identities = 301/425 (71%), Gaps = 5/425 (1%) Strand=Plus/Minus Query 2005 AACGGTTCACGAATCCTGTTCGGCGCCCGTGAGAAGGGGTTCGGCCGAGGGTTCGCCAAG 2064 |||||||| || || |||| || || || ||| || ||||| || |||||||| ||| Sbjct 7144 AACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTCGCGAAG 7085 Query 2065 GTCGACGTTCTGATTTTCGATGAGGCGCAGATTCTCACCGAAAACGCGATGGACGACATG 2124 || ||||| ||||| ||||||||||||||||| ||||| || || || ||||| |||||| Sbjct 7084 GTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAGGACATG 7025 Query 2125 ATCCCCGCGACGAACGCCTCGCCTAACGGCCTGATCCTGTTCGCCGGTACGCCGCCGAAA 2184 | || || |||||||| | ||||| || ||| | | | ||| || || ||| Sbjct 7024 GTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCCCCGCGC 6965 Query 2185 CCTACTGACCCCGGCGAGGTGTTCACCAACCTGCGGCAGGAGGCCCTCGACGGCGAGAGC 2244 || || ||||| |||||||||||| | | | ||| | | ||| || |||||| | Sbjct 6964 CCCACGGACCCGGGCGAGGTGTTCTCGATGCGCCGGGACGCGGCACTGTCGGGCGAGGAC 6905 Query 2245 GACGACGTGGGTTACGTCGAAATCTCGGCCGACGAGGACGCGAAGCCTGACGA-CGAACG 2303 |||||| ||||| || | |||||||| |||||||||| || ||||| || || Sbjct 6904 CCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACGACCGTGCG 6845 Query 2304 TCAGTGGCGCAAGATGAATCCGAGCTACCCGCACCGCACGTCGCGCCGAGCGATTCAGCG 2363 | |||||| ||| ||| ||| | ||||||||| ||| | ||||| ||| Sbjct 6844 GC-GTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCGATCTTGCG 6786 Query 2364 TATGCGGAA--AGC-GTTGTCGGAGGACAGCTTTCGCCGCGAGGCAATGGGCATCTGGGA 2420 |||||||| || | ||| | || |||||||| |||| ||||||||||||| Sbjct 6785 CATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGGGCATCTGGGA 6726 Query 2421 CAAGA 2425 | ||| Sbjct 6725 CGAGA 6721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199764683569635