Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq117 152 3e-32 >seq117 Length=8551 Score = 152 bits (168), Expect = 3e-32 Identities = 177/232 (76%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 58472 CGTCGACTCCATCGTCACCGACCCGCCCTACGAACTGGGATTCATGGGCAAGAAGTGGGA 58531 ||| ||| | |||||||||||||||||||||| || || |||||||||||||| ||||| Sbjct 7710 CGTTGACGCAATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGA 7769 Query 58532 CGGCTCGGGCATCGCTTTCGATGTCGAGATGTG--GGAGCAATGCCTGCGGGTCCTCAAG 58589 |||| | | || || || || ||| | | ||| ||| ||||| |||||| Sbjct 7770 CGGC-CTTCCCCCG---TCACTG--GA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAG 7821 Query 58590 CCCGGGGGGCACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTGACCGTGGCC 58649 ||||| || ||| | ||| ||||| ||| |||||||||||||||| || |||| ||| Sbjct 7822 CCCGGTGGACACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTCGCC 7881 Query 58650 ATCGAGGACGCGGGCTTCGAGATTCGCGACTCAATCGCGTGGCTGTATGGGT 58701 ||||| ||||| || ||||| || |||||||| |||| ||||| || |||| Sbjct 7882 ATCGAAGACGCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGT 7933 Score = 96.9 bits (106), Expect = 2e-15 Identities = 125/172 (73%), Gaps = 3/172 (2%) Strand=Plus/Plus Query 59832 GTCACTGCCCCGGCGACTGATGCAGCGCGGCAGTGGGAGGGTTGGGGGACGGCGCTCAAG 59891 ||||| ||||| |||||| || || ||||||||| || ||||| ||||| || ||| Sbjct 8302 GTCACCGCCCCCGCGACTCCTGAGGCCGCGCAGTGGGACGGCTGGGGCACGGCTCTAAAG 8361 Query 59892 CCTGCGTTTGAGCCGATTGTGGTGGCGCGTAAGCCTCTTGC---GGGCACGGTCGCGGCG 59948 || ||||||||||| || ||| | || |||||||| || || | || || || | Sbjct 8362 CCCGCGTTTGAGCCTATCGTGCTCGCCCGTAAGCCCCTCGCCGAGAAGACCGTTGCTAGG 8421 Query 59949 AACGTGCTCGAACACGGAACCGGCGCGCTCAACATCGACGCCTGCCGCATCG 60000 ||||| |||| | || ||||| || ||||| | ||||| ||| | |||| Sbjct 8422 AACGTCCTCGCGTATGGGACCGGAGCAATCAACGTGGACGCGTGCAGGATCG 8473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243905104303605