Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023692.1 Length=48984 Score E Sequences producing significant alignments: (Bits) Value seq117 107 6e-19 >seq117 Length=8551 Score = 107 bits (118), Expect = 6e-19 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 38521 TGGGCGGGCGAGTGCCTGCGGATCCTCAAGCCTGGCGGTTACATGCTGGCGTTCGGAGGC 38580 ||||| | | |||| ||| | |||||||| || || |||| || ||||| ||| Sbjct 7792 TGGGCCGAAGCGTGCTACCGGGTACTCAAGCCCGGTGGACACATCGCCGCTTTCGGTGGC 7851 Query 38581 TCGCGCACCTGGCACCGGCTCG-CGTCTGCGATCGAGGACGCCGGTTTCGAGGTTCGCGA 38639 | |||||||||||||| |||| |||| || ||||| ||||| || ||||| | ||||| Sbjct 7852 ACCCGCACCTGGCACCGCCTCGCCGTC-GCCATCGAAGACGCAGGATTCGAAATGCGCGA 7910 Query 38640 CTCGATCGCGTGGCTGTTCGGTTCCGGGTTTCCGAAGTCGCTCGATGTGTCCAAGGCGAT 38699 ||| |||| ||||| | ||| || || || |||||||| | || ||| ||||| || Sbjct 7911 CTCCCTCGCCTGGCTATACGGGTCAGGATTCCCGAAGTCCTTGGACGTGGGGAAGGCAAT 7970 Query 38700 CGA 38702 ||| Sbjct 7971 CGA 7973 Score = 84.2 bits (92), Expect = 7e-12 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38257 CACCACGGCGACTGCCTCGACGTGCTCGCGCAGCTGCCCGACGCGAGCGTTGACGCCGTG 38316 ||||||||||||||| |||| || | ||| |||||| || ||||||||| | Sbjct 7663 CACCACGGCGACTGCATCGAGGTCATGAACCAGATGCCCGCCGAATCCGTTGACGCAATC 7722 Query 38317 GTGACTGACCCGCCCTACGGGATTCGGTTCATGGGCAAGGCATGGGACGGC 38367 || || |||||||||||||| | | |||||||||||| |||||||||| Sbjct 7723 GTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGACGGC 7773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156625888736660