Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023695.1 Length=52481 Score E Sequences producing significant alignments: (Bits) Value seq117 179 1e-40 >seq117 Length=8551 Score = 179 bits (198), Expect = 1e-40 Identities = 193/249 (78%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 41751 GGATTTCGGGAACCCGCTGCCGTAGAGCCAGGCGATGGAGTCGCGGATCTCGAAGCCCGC 41810 ||| |||||||| || ||||| |||||||||| ||||||||| || ||||| || || Sbjct 7950 GGACTTCGGGAATCCTGACCCGTATAGCCAGGCGAGGGAGTCGCGCATTTCGAATCCTGC 7891 Query 41811 GTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCACCGAAGGCGAGCAGGTG 41870 ||| |||||||| |||| || |||||||||||||||| ||||||||| ||| | ||| Sbjct 7890 GTCTTCGATGGCGACGGCGAGGCGGTGCCAGGTGCGGGTGCCACCGAAAGCGGCGATGTG 7831 Query 41871 CCCACCGGGCTTGAGGACCCGCAGGCATTGCTCC--CACATCTCGACATCGAAAGCGATG 41928 |||||||||||||| ||||| ||| ||| | | ||| || || || || | Sbjct 7830 TCCACCGGGCTTGAGTACCCGGTAGCA-CGCTTCGGCCCAT-TC--CAGTGA---CGGGG 7778 Query 41929 CCCGAGCCGTCCCACTTCTTGCCCATGAATCCCAGTTCGTAGGGCGGGTCGGTGACGATG 41988 | ||||||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct 7777 GAAG-GCCGTCCCATTTCTTGCCCATGAAGCCGAGGCCGTAGGGCGGGTCGGTGACGATT 7719 Query 41989 GAGTCGACG 41997 | ||| ||| Sbjct 7718 GCGTCAACG 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167816195052030