Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023699.1 Length=59016 Score E Sequences producing significant alignments: (Bits) Value seq117 158 5e-34 >seq117 Length=8551 Score = 158 bits (174), Expect = 5e-34 Identities = 221/300 (74%), Gaps = 14/300 (5%) Strand=Plus/Plus Query 43748 TCTACCACGGCGACTGCCTGCACGTGCTCGCCGAGCTGCCCGATCGCAGC-GTCGACGCC 43806 || |||||||||||||| | | || | | || |||||| || | | || ||||| Sbjct 7661 TCCACCACGGCGACTGCATCGAGGTCATGAACCAGATGCCCGC-CGAATCCGTTGACGCA 7719 Query 43807 GTGGTTTGCGACCCACCCTACGAGCTGGAGTTCATGGGCAAGAAGTGGGACGGCTCGGGC 43866 | || |||||| ||||||| || | |||||||||||||| ||||||||| | Sbjct 7720 ATCGTCACCGACCCGCCCTACGGCCTCGGCTTCATGGGCAAGAAATGGGACGGC-----C 7774 Query 43867 ATCGCCTTCGACGTCGAGATGTG--GAAGCAATGCCTGCGGGTCCTCAAACCCGGTGGGC 43924 || || || | || ||| | ||||| ||| ||||| ||||| |||||||| | Sbjct 7775 TTCCCCCGTCAC-TGGA-ATGGGCCGAAGCG-TGCTACCGGGTACTCAAGCCCGGTGGAC 7831 Query 43925 ACCTGCTCGCCTTCGGCGGCTCCCGCACCTGGCACCGGCTCG-CGTCGGCCATCGAGGAC 43983 || | ||| ||||| ||| |||||||||||||||| |||| |||| |||||||| ||| Sbjct 7832 ACATCGCCGCTTTCGGTGGCACCCGCACCTGGCACCGCCTCGCCGTC-GCCATCGAAGAC 7890 Query 43984 GCGGGCTTCGAGATCCGCGACTCCATCGCCTGGCTCAACGGCAGCGGATTCCCGAAATCC 44043 || || ||||| || ||||||||| |||||||||| |||| ||||||||||| ||| Sbjct 7891 GCAGGATTCGAAATGCGCGACTCCCTCGCCTGGCTATACGGGTCAGGATTCCCGAAGTCC 7950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188728019979380