Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023704.1 Length=51421 Score E Sequences producing significant alignments: (Bits) Value seq117 120 1e-22 >seq117 Length=8551 Score = 120 bits (132), Expect = 1e-22 Identities = 126/166 (76%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 40390 TGTCGATGGCCTTGGACACGTCGAGCGACTTCGGAAACCCGCTGCCGTACAGCCACGCGA 40449 ||||||| ||||| |||||| | |||||||| || || ||||| ||||| |||| Sbjct 7975 TGTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCAGGCGA 7916 Query 40450 TGGAGTCGCGGATCTCGAAACCGGCGTCCTCAATGGCAACGGTCAGGCGGTGCCAGGTGC 40509 ||||||||| || ||||| || ||||| || ||||| |||| |||||||||||||||| Sbjct 7915 GGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCAGGTGC 7856 Query 40510 GCGAACCTCCGAAGGCGAACAGGTGCCCGCCCGGTTTGAGGACTCG 40555 | | || ||||| ||| | ||| || || || ||||| || || Sbjct 7855 GGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCG 7810 Score = 91.5 bits (100), Expect = 5e-14 Identities = 102/136 (75%), Gaps = 3/136 (2%) Strand=Plus/Minus Query 40229 GCAGGCGTCGATGTTGAGTGCCCCGGTGCCGTGCGCCAGCACGTTCGCCGCCACGGTGCC 40288 ||| ||||| | ||||| ||| ||||| || | ||| || |||||| || ||||| Sbjct 8466 GCACGCGTCCACGTTGATTGCTCCGGTCCCATACGCGAGGACGTTCCTAGCAACGGTCTT 8407 Query 40289 C---GCCAGCGGTTTTCGCGCGACCACGATGGGCTCAAAGGCGGGTTTCAGCGCGGTGCC 40345 | || || || || || |||| |||||| |||||||| ||||| || || || ||||| Sbjct 8406 CTCGGCGAGGGGCTTACGGGCGAGCACGATAGGCTCAAACGCGGGCTTTAGAGCCGTGCC 8347 Query 40346 CCAGCCCTGCCACTGC 40361 |||||| | ||||||| Sbjct 8346 CCAGCCGTCCCACTGC 8331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164424223449430