Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023720.1 Length=53142 Score E Sequences producing significant alignments: (Bits) Value seq117 123 8e-24 >seq117 Length=8551 Score = 123 bits (136), Expect = 8e-24 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 41491 CCGGTCGATGGCCTTGGATACGTCGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCAGGC 41550 || |||||| ||||| ||||| | ||||||||||| || ||||| |||||||| Sbjct 7977 CCTGTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCAGGC 7918 Query 41551 GATGGAGTCGCGGAGCTCAAACCCGGCGTCCTCGATCGCCGCCGCCAGCCGGTGCCAGGT 41610 || ||||||||| | || || || ||||| ||||| || | || || ||||||||||| Sbjct 7917 GAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCAGGT 7858 Query 41611 GCGGGAGCCGCCGAAGGCGAGCAGGTACCCACCCGGCTTGAGGACCCG 41658 ||||| ||| ||||| ||| | || ||||| |||||||| ||||| Sbjct 7857 GCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCG 7810 Score = 93.3 bits (102), Expect = 1e-14 Identities = 122/167 (73%), Gaps = 9/167 (5%) Strand=Plus/Minus Query 41221 GCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCCGCCACCGTGCC 41280 ||| ||||| | ||| | || || || || | | | ||||||||| || || || Sbjct 8466 GCACGCGTCCACGTTGATTGCTCCGGTCCCATACGCGAGGACGTTCCTAGCAACGGTCTT 8407 Query 41281 C---GCCAGGGGTTTCCGCGCGACCACGATGGGCTCAAACGCCGGTTTCAGCGCCGTACC 41337 | || ||||| || || |||| |||||| ||||||||||| || || || ||||| || Sbjct 8406 CTCGGCGAGGGGCTTACGGGCGAGCACGATAGGCTCAAACGCGGGCTTTAGAGCCGTGCC 8347 Query 41338 CCAGCCCTGCCACTGCTTGGCGGCGTCGG---TCGCGGGGGCGGTGA 41381 |||||| | ||||||| ||||| || | ||||||||||||||| Sbjct 8346 CCAGCCGTCCCACTGC---GCGGCCTCAGGAGTCGCGGGGGCGGTGA 8303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169931377343840