Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023723.1 Length=53684 Score E Sequences producing significant alignments: (Bits) Value seq117 165 3e-36 >seq117 Length=8551 Score = 165 bits (182), Expect = 3e-36 Identities = 204/273 (75%), Gaps = 12/273 (4%) Strand=Plus/Minus Query 41881 CCGGTCGATGGCCTTGGATACGTCGAGCGACTTCGGGAACCCGGATCCGTACAGCCAGGC 41940 || |||||| ||||| ||||| | ||||||||||| || || ||||| |||||||| Sbjct 7977 CCTGTCGATTGCCTTCCCCACGTCCAAGGACTTCGGGAATCCTGACCCGTATAGCCAGGC 7918 Query 41941 GATGGAGTCACGAATCTCGAAACCGGCGTCCTCGATGGCCACGGCCAGCCGGTGCCAGGT 42000 || |||||| || || ||||| || ||||| |||||||| ||||| || ||||||||||| Sbjct 7917 GAGGGAGTCGCGCATTTCGAATCCTGCGTCTTCGATGGCGACGGCGAGGCGGTGCCAGGT 7858 Query 42001 GCGCGAACCGCCGAACGCCAACATGTGCCCACCCGGCTTGAGGACCCGCAGGCATTGCTC 42060 ||| | || ||||| || ||||| ||||| |||||||| ||||| ||| ||| Sbjct 7857 GCGGGTGCCACCGAAAGCGGCGATGTGTCCACCGGGCTTGAGTACCCGGTAGCA-CGCTT 7799 Query 42061 C--CACATCTCGACATCGA-AGGCGATGCCCGAGTTGTCCCACTTCTTGCCCATGAATCC 42117 | | ||| || || || || || | || |||||| |||||||||||||| || Sbjct 7798 CGGCCCAT-TC--CAGTGACGGGGGAAGGCC-----GTCCCATTTCTTGCCCATGAAGCC 7747 Query 42118 CAGTTCGTAGGGCGTGTCTGTGAGAATTGCATC 42150 || ||||||||| ||| |||| ||||| || Sbjct 7746 GAGGCCGTAGGGCGGGTCGGTGACGATTGCGTC 7714 Score = 98.7 bits (108), Expect = 3e-16 Identities = 128/175 (73%), Gaps = 9/175 (5%) Strand=Plus/Minus Query 41603 CCGATTCGGCAGGCGTCGATGTTCAACGCCCCCGTACCGTGCTCCAGGACGTTCGCCGCC 41662 ||||| | ||| ||||| | ||| | || || || || | | | ||||||||| || Sbjct 8474 CCGATCCTGCACGCGTCCACGTTGATTGCTCCGGTCCCATACGCGAGGACGTTCCTAGCA 8415 Query 41663 ACCGTGCCCACG---AGAGGCTTGCGCGCGACCACGATGGGCTCAAACGCCGGTTTCAGC 41719 || || | || || ||||| || |||| |||||| ||||||||||| || || || Sbjct 8414 ACGGTCTTCTCGGCGAGGGGCTTACGGGCGAGCACGATAGGCTCAAACGCGGGCTTTAGA 8355 Query 41720 GCCGTACCCCAGCCCTGCCACTGCTTGGCGGCGTCGG---TCGCGGGGGCGGTGA 41771 ||||| |||||||| | ||||||| ||||| || | ||||||||||||||| Sbjct 8354 GCCGTGCCCCAGCCGTCCCACTGC---GCGGCCTCAGGAGTCGCGGGGGCGGTGA 8303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171665762823660