Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq334 185 4e-42 >seq334 Length=7771 Score = 185 bits (204), Expect = 4e-42 Identities = 312/446 (70%), Gaps = 13/446 (3%) Strand=Plus/Minus Query 1490 AGGCTGTCCTGTTCACGAACGGCTCACGGATCCTGTTCGGCGCCCGTGAAAAAGGCTTCG 1549 |||| || | |||| |||||| || || || |||| || || || || ||||||| Sbjct 7161 AGGCGATCGTTTTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCG 7102 Query 1550 GTCGTGGTTTCGCGAAGGTCGACGTGCTGATCTTCGACGAGGCGCAGATTCTCACCGAAA 1609 ||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| || | Sbjct 7101 GTCGTGGGTTCGCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGA 7042 Query 1610 ACGCAATGGACGACATGGTGCCGGCGACGAACGCGTCGCCGAACGCGCTAATCCTGCTGG 1669 | || ||||| |||||||| ||||| ||||||||| | || || | || | | || Sbjct 7041 AGGCCATGGAGGACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGA 6982 Query 1670 CCGGCACACCGCCGAAGCCAACCGACCCGGGTGAGGTGTTCACCAATCTGCGGCAGGAAG 1729 |||||| || ||| || || |||||||| ||||||||| | | |||| | ||| | Sbjct 6981 TCGGCACTCCCCCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGA---TGCGCCGGGACG 6925 Query 1730 CG---CTCGACGGCGAGTCTTCCGACGTCGGTTACGTCGAAATCTCGGCCGACGACGACG 1786 || || |||||| | ||||| ||||| || | |||||||| | |||| Sbjct 6924 CGGCACTGTCGGGCGAGGACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACG 6865 Query 1787 CGGAGCCTGACGACGTCACCCAGTACCCGAAGATGAACCCAAGCTATCCGCACCGCACGT 1846 || | || |||||| | || | |||| |||||| | |||||||| ||| Sbjct 6864 CGAACCCGGACGACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACG- 6806 Query 1847 CGCTGCGG--TCGATTCTGCGTATGCGGAA--AGC-GTTGTCTTACGACAGCTTCCGCCG 1901 | || || |||| |||| |||||||| || | |||| ||| || ||||| Sbjct 6805 -GGTGAGGGCGCGATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCG 6747 Query 1902 GGAAGCAATGGGAATCTGGGACAAGA 1927 || | |||| ||||||||| ||| Sbjct 6746 TGAGGGTCTGGGCATCTGGGACGAGA 6721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201444669134760