Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq334 150 7e-32 >seq334 Length=7771 Score = 150 bits (166), Expect = 7e-32 Identities = 296/429 (69%), Gaps = 28/429 (7%) Strand=Plus/Minus Query 2029 TGTTCGGCGCTCGTGAGAAAGGTTTCGGCCGCGGTTTCGCCAAGGTCGACGTTCTGATTT 2088 |||| || ||||| ||| || ||||| || || ||||| ||||| ||||| ||||| | Sbjct 7128 TGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTCGCGAAGGTGGACGTGCTGATCT 7069 Query 2089 TCGACGAGGCTCAGATCCTCAGTGAAAACGCAATGGACGACATGGTTCCGGCGACCAACG 2148 |||| ||||| |||||||||| || || || ||||| |||||||||||||| || |||| Sbjct 7068 TCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAGGACATGGTTCCGGCAACGAACG 7009 Query 2149 CCTCGCCTAACGGTCTGATCCTGTTCGCG---GGCACCCCGCCGAAGCCGACAGATCCCG 2205 | | ||||| |||||| | |||| | ||||| || ||| || || || || | Sbjct 7008 CGGCACCTAATGGTCTGGT---GTTCATGATCGGCACTCCCCCGCGCCCCACGGACCCGG 6952 Query 2206 GCGAGGTGTTCACCAACCTGCGGCTGGATGCG-----ATCAACGGTGAATCTGACGACGT 2260 ||||||||||| | | |||| | ||| ||| || | | | | | ||||| Sbjct 6951 GCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCACTGTCGGGCGAGGACCCG--GACGT 6897 Query 2261 TGCCTATGTCGAGATTTCGGCCGACGAGAACGACGACCCAGACGAAGAGTCGACGTGGCG 2320 || || ||| | |||||||| || ||| |||| ||||| || ||||||| Sbjct 6896 GATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACGACCGTGCGGCGTGGCG 6837 Query 2321 CAAGATGAATCCGAGCTACCCGCACCGGACGTCTGCCCGCGCTATCCGCCGTATGCGTAA 2380 ||| ||| ||| | ||||||||||||| || |||| ||| || ||||| || Sbjct 6836 GAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCGATCTTGCGCATGCGGAA 6777 Query 2381 ------AGCGT-TGTCCTGGGACAGTTTCAGGCGCGAGGCAATGGGCATCTGGGACAAG- 2432 | || |||| | | | ||||| | || |||| |||||||||||||| || Sbjct 6776 GCTGCTGGGGTCTGTC--GAGTC-GTTTC-GCCGTGAGGGTCTGGGCATCTGGGACGAGA 6721 Query 2433 ATCAGCGTG 2441 | ||||||| Sbjct 6720 AGCAGCGTG 6712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190827202405140