Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_024143.1 Length=53255 Score E Sequences producing significant alignments: (Bits) Value seq117 158 4e-34 >seq117 Length=8551 Score = 158 bits (174), Expect = 4e-34 Identities = 188/252 (75%), Gaps = 16/252 (6%) Strand=Plus/Minus Query 41046 GGATTTTGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGATCTCGAAGCCCGC 41105 ||| || ||||| || ||||| ||||| |||| |||||||| || ||||| || || Sbjct 7950 GGACTTCGGGAATCCTGACCCGTATAGCCAGGCGAGGGAGTCGCGCATTTCGAATCCTGC 7891 Query 41106 GTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTG 41165 ||| |||||||| |||| || |||||||||||||||| ||| ||||| ||| | ||| Sbjct 7890 GTCTTCGATGGCGACGGCGAGGCGGTGCCAGGTGCGGGTGCCACCGAAAGCGGCGATGTG 7831 Query 41166 CCCACCGGGCTTGAGGACCCGCAGGCATTGCTCC--CACATCTC---GACGTCGAAAGCG 41220 |||||||||||||| ||||| ||| ||| | | ||| | |||| | ||| Sbjct 7830 TCCACCGGGCTTGAGTACCCGGTAGCA-CGCTTCGGCCCATTCCAGTGACGGGGGAAG-- 7774 Query 41221 ATGCCCGAGTTGTCCCACTTCTTGCCCATGAAGGCCAGTTCGTAGGGCGGGTCGGTGACG 41280 ||| |||||| ||||||||||||||| | || |||||||||||||||||||| Sbjct 7773 --GCC------GTCCCATTTCTTGCCCATGAAGCCGAGGCCGTAGGGCGGGTCGGTGACG 7722 Query 41281 ATGGAGTCGACG 41292 || | ||| ||| Sbjct 7721 ATTGCGTCAACG 7710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170292974316570