Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_024147.1 Length=57315 Score E Sequences producing significant alignments: (Bits) Value seq334 253 7e-63 >seq334 Length=7771 Score = 253 bits (280), Expect = 7e-63 Identities = 286/383 (75%), Gaps = 0/383 (0%) Strand=Plus/Minus Query 1063 TTTAAGAACGGTTCGCGCATCCTGTTCGGCGCCCGCGAGCGCGGGTTCGGTCGTGGGTTC 1122 || ||||||||||||||||| |||| || || |||||| || ||||||||||||||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1123 GCCGGTGTCGACGTCCTGATTTTCGACGAGGCGCAGATCCTCACCGAGAACGCGATGGAC 1182 || || ||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 1183 GACATGGTGCCCGCGACGAACGCGGCGCCTAACCCGCTGATCCTGCTGGCCGGTACGCCG 1242 |||||||| || || ||||||||||| ||||| ||| | | || ||| || || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 1243 CCGAAACCGACGGACCCCGGCGAGGTGTTCACGGTGCTGCGCGCCGACGCCCTGGCGGGC 1302 ||| || |||||||| |||||||||||| || ||| || | || || ||| ||||| Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGATGCGCCGGGACGCGGCACTGTCGGGC 6911 Query 1303 GACGTCGACGACGTCGGGTTCGTCGAGATTTCCGCCGACGAGGACGCCGACCCCGACGAC 1362 || | | ||||| || ||| ||| | || ||||| ||||||| |||| |||||| Sbjct 6910 GAGGACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACGAC 6851 Query 1363 CGCTCGCAGTGGCGCAAGATGAATCCGAGCTACCCGCACCGGACGTCGGCCCGCGCGATC 1422 || || |||||| ||| ||| ||| | ||||||||||||| | |||||||| Sbjct 6850 CGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCGATC 6791 Query 1423 CTGCGTATGCGTAAGGCGTTGGG 1445 |||| ||||| ||| | |||| Sbjct 6790 TTGCGCATGCGGAAGCTGCTGGG 6768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183284865549170