Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_024366.1 Length=62661 Score E Sequences producing significant alignments: (Bits) Value seq334 196 2e-45 >seq334 Length=7771 Score = 196 bits (216), Expect = 2e-45 Identities = 306/433 (71%), Gaps = 11/433 (3%) Strand=Plus/Minus Query 1738 TTCACCAACGGTTCTCGAATCCTGTTCGGCGCCCGCGAAAAGGGCTTCGGTCGTGGTTTC 1797 |||| |||||||| || || |||| || || ||||| |||||||||||||| ||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1798 GCGAAGGTCGACGTGCTGATTTTCGACGAGGCGCAGATTCTCACCGAGAACGCAATGGAC 1857 |||||||| ||||||||||| ||||| ||||||||||| ||||| ||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 1858 GACATGGTGCCGGCGACGAACGCGTCACCTAACGCGCTGATCCTGCTGGCCGGCACACCG 1917 |||||||| ||||| ||||||||| ||||||| | ||| | | || |||||| || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 1918 CCGAAGCCGACCGATCCCGGTGAGGTGTTCACGAATCTTCGGCTCGAAGCGATCAACGGC 1977 ||| || || || || || ||||||||| ||| | ||| || || | ||| Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGATGCGCCGGGACGCGGCACTGTCGGGC 6911 Query 1978 GAGTCGACC--GACGTCGGCTATGTCGAAATTTCGGCCGACGAGGACGCGGAACCGGACG 2035 ||| |||| ||||| || || || | |||||||| |||||||| | ||||||| Sbjct 6910 GAG--GACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGACG 6853 Query 2036 ACGTCACCCAGTACCCGAAGATGAACCCAAGCTACCCGCATCGCACGTCGCTGCGG--TC 2093 || | || | |||| |||||| | |||||| || ||| | || || | Sbjct 6852 ACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACG--GGTGAGGGCGC 6795 Query 2094 GATTCAGCGCATGCGGAAAGCGCT---GTCTTGGGACAGCTTCCGACGCGAAGCAATGGG 2150 ||| |||||||||||| ||| |||| || || || || || | |||| Sbjct 6794 GATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGGG 6735 Query 2151 CATCTGGGACAAG 2163 |||||||||| || Sbjct 6734 CATCTGGGACGAG 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200388678208110