Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_026603.1 Length=61251 Score E Sequences producing significant alignments: (Bits) Value seq334 208 3e-49 >seq334 Length=7771 Score = 208 bits (230), Expect = 3e-49 Identities = 310/434 (71%), Gaps = 13/434 (3%) Strand=Plus/Minus Query 1893 TTCACGAACGGTTCACGCATCCTGTTCGGCGCCCGTGAGAAGGGTTTCGGCCGCGGTTTC 1952 |||| ||||||||| ||||| |||| || || || ||| || ||||| || || ||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1953 GCCAAGGTCGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAACGCGATGGAC 2012 || ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 2013 GACATGGTTCCCGCGACCAACGCCTCGCCTAACGCGCTGATCCTGCTCGCCGGTACGCCG 2072 ||||||||||| || || ||||| | ||||| | ||| | | | ||| || || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 2073 CCGAAGCCGAACGATCCCGGCGAGGTGTTCACGAACCTGCGCATGGACGCG---ATCAAC 2129 ||| || | || || |||||||||||| ||| ||||| ||||||| | Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCGA---TGCGCCGGGACGCGGCACTGTCG 6914 Query 2130 GGCGAGTCGACC--GACGTCGGGTATATCGAGATCTCGGCCGACGAGGACGCGCAGCCCG 2187 |||||| |||| ||||| ||| | ||| | |||||||| |||||||| | || | Sbjct 6913 GGCGAG--GACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGG 6856 Query 2188 ACGACGTCACGCAGTACCCGAAGATGAACCCGAGCTACCCGCACCGCACCTCGCTGCGCT 2247 ||||| || || | |||| ||||||| | ||||||||| || | || Sbjct 6855 ACGACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCG 6796 Query 2248 CGATCCTGCGTATGCGTAAG--GC-GTTGTCATGGGACAGCTTTCGCCGCGAGGCAATGG 2304 ||||| |||| ||||| ||| || | ||| || |||||||| |||| ||| Sbjct 6795 CGATCTTGCGCATGCGGAAGCTGCTGGGGTCTGTCGAGTCGTTTCGCCGTGAGGGTCTGG 6736 Query 2305 GCATCTGGGACAAG 2318 ||||||||||| || Sbjct 6735 GCATCTGGGACGAG 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195879960103730