Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq481 138 1e-27 >seq481 Length=6868915 Score = 138 bits (152), Expect = 1e-27 Identities = 316/465 (68%), Gaps = 18/465 (4%) Strand=Plus/Plus Query 59658 GATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTC 59717 || ||||| || ||||| ||| ||||| || |||||||| ||||| || |||||| Sbjct 948871 GACTGGGAGAATCTCAACGACGGCGAGCGACACTTCATCAAACACGTCCTCGCTTTCTTC 948930 Query 59718 GCGGCGAGTGATGGAATTGTGATGGAAAATATAGA---CATGAACTTTTCCAAGGATGTC 59774 || || || ||||| || |||| ||| | | || | | | ||| ||||| Sbjct 948931 GCCGCCTCAGACGGAATCGTCCTGGAGAATCTTGCTTCCAGGTTCATGTCC---GATGTA 948987 Query 59775 CAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCACTC 59833 || | | ||||| || | ||||| | | ||| ||| | |||| |||||||| Sbjct 948988 CAAGTCTCGGAGGCGCGTGCTTTCTATGGATTCCAGATCGCG-ATCGAGAACATCCACTC 949046 Query 59834 CGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCT 59893 |||| |||| ||| | |||||| || ||||||| |||||| | ||| Sbjct 949047 GGAGATGTACAGTCTCCTCCTCGATACGTACATCAAGGACAACAAAGAGAGAGACCATCT 949106 Query 59894 GTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGT 59952 ||||| || || || || |||| || || | |||||| | ||||||||| ||| Sbjct 949107 CTTCCGAGCAATCGAAACCATCCCTTGC-GTCGCGAAGAAAGCACAGTGGGCCATGAAGT 949165 Query 59953 GGATGAGTCCTGGAGCATCA----TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAA 60008 |||| | | ||| | ||| || || || | |||| ||||| || ||||| ||| Sbjct 949166 GGATC-GAC--GGATC-TCAGACCTTCGCCGAAAGAATCATCGCTTTCGCCTGCGTCGAA 949221 Query 60009 GGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATG 60068 || ||||||||||| || ||||| | || |||||||| || ||||| || |||||| Sbjct 949222 GGTATCTTCTTCTCCGGTAGCTTCTGCTCGATCTTCTGGCTGAAGAAGCGAGGGCTCATG 949281 Query 60069 CCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 ||||| ||| |||||||||||| |||| || || || || ||| Sbjct 949282 CCGGGATTGACCTTCTCCAACGAGTTGATCTCTCGAGATGAAGGC 949326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548519966125200