Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028747.1 Length=47618 Score E Sequences producing significant alignments: (Bits) Value seq117 127 6e-25 >seq117 Length=8551 Score = 127 bits (140), Expect = 6e-25 Identities = 139/185 (75%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 37177 GAGTGGGCCGCCGAGTGCCTGCGCGTGCTGAAGCCCGGCGGGCACCTGCTCGCGTTCGGC 37236 || ||||||| | |||| || || || |||||||| || ||| | ||| ||||| Sbjct 7789 GAATGGGCCGAAGCGTGCTACCGGGTACTCAAGCCCGGTGGACACATCGCCGCTTTCGGT 7848 Query 37237 GGCACCCGCATGTGGCACCGGCTAGCGGCGGCGATCGAGGACGCCGGGTTCGAGATCCGC 37296 |||||||||| |||||||| || || | || ||||| ||||| || ||||| || ||| Sbjct 7849 GGCACCCGCACCTGGCACCGCCTCGCCGTCGCCATCGAAGACGCAGGATTCGAAATGCGC 7908 Query 37297 GACTCCATCGCCTGGCTGTACGGCAGCGGCTTCCCGAAGTCGCTCGACGTATCCAAGGCC 37356 |||||| |||||||||| ||||| || ||||||||||| | ||||| ||||| Sbjct 7909 GACTCCCTCGCCTGGCTATACGGGTCAGGATTCCCGAAGTCCTTGGACGTGGGGAAGGCA 7968 Query 37357 ATCGA 37361 ||||| Sbjct 7969 ATCGA 7973 Score = 84.2 bits (92), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 37755 GTGGCAGGGCTGGGGCACGGCGCTTAAGCCCGCGTTCGAGCCCATCGTGGTCGCGCGAAA 37814 |||| | |||||||||||||| || ||||||||||| ||||| |||||| |||| || || Sbjct 8334 GTGGGACGGCTGGGGCACGGCTCTAAAGCCCGCGTTTGAGCCTATCGTGCTCGCCCGTAA 8393 Query 37815 ACCTTTGGC---GGGCACCGTCGCGGCGAACGTGCTGGAGCATGGCACCGGTGCACTGAA 37871 || | || | ||||| || |||||| || | | |||| ||||| ||| | || Sbjct 8394 GCCCCTCGCCGAGAAGACCGTTGCTAGGAACGTCCTCGCGTATGGGACCGGAGCAATCAA 8453 Query 37872 TATCGACGCCTGCCGCATCG 37891 | ||||| ||| | |||| Sbjct 8454 CGTGGACGCGTGCAGGATCG 8473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152254725331800