Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= NC_028759.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq334 235 2e-57 >seq334 Length=7771 Score = 235 bits (260), Expect = 2e-57 Identities = 279/377 (74%), Gaps = 6/377 (2%) Strand=Plus/Minus Query 1063 TTTAAGAACGGCTCGCGCATCCTGTTCGGTGCCCGCGAGCGCGGGTTCGGCCGCGGGTTC 1122 || |||||||| |||||||| |||| ||||| |||||| || ||||| || |||||| Sbjct 7150 TTCAAGAACGGTTCGCGCATTTTGTTTGGTGCTCGCGAGTCTGGCTTCGGTCGTGGGTTC 7091 Query 1123 GCCGGTGTCGACGTCCTGATTTTCGACGAGGCGCAGATCCTCACCGAGAACGCAATGGAC 1182 || || ||||| ||||| ||||| ||||||||||||||||| ||||| || ||||| Sbjct 7090 GCGAAGGTGGACGTGCTGATCTTCGATGAGGCGCAGATCCTCACGGAGAAGGCCATGGAG 7031 Query 1183 GACATGGTGCCCGCGACGAACGCGGCGCCTAACCCGCTGATCCTGCTGGCCGGTACGCCG 1242 |||||||| || || ||||||||||| ||||| ||| | | || ||| || || Sbjct 7030 GACATGGTTCCGGCAACGAACGCGGCACCTAATGGTCTGGTGTTCATGATCGGCACTCCC 6971 Query 1243 CCGAAACCGACGGACCCCGGCGAGGTGTTCACGGTGATGCGCCTCGACGCC---CTGGCG 1299 ||| || |||||||| |||||||||||| || ||||||| ||||| ||| || Sbjct 6970 CCGCGCCCCACGGACCCGGGCGAGGTGTTCTCG---ATGCGCCGGGACGCGGCACTGTCG 6914 Query 1300 GGCGACGTCGACGACCTCGGGTTCGTCGAGATTTCCGCCGACGAGGACGCCGACCCCGAC 1359 ||||| | | ||| | || ||| ||| | || ||||| ||||||| |||| ||| Sbjct 6913 GGCGAGGACCCGGACGTGATGTACGTGGAGCTGTCGGCCGATAAGGACGCGAACCCGGAC 6854 Query 1360 GACCGCTCGCAGTGGCGCAAGATGAATCCGAGCTACCCGCACCGGACGTCGGCCCGCGCG 1419 ||||| || |||||| ||| ||| ||| | ||||||||||||| | ||||| Sbjct 6853 GACCGTGCGGCGTGGCGGAAGGCGAACCCGTCGTTCCCGCACCGGACGGGTGAGGGCGCG 6794 Query 1420 ATCCTGCGTATGCGTAA 1436 ||| |||| ||||| || Sbjct 6793 ATCTTGCGCATGCGGAA 6777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185684845456670